Cow genome map


           Conread name:
           Pla1-C0000039_P16
        

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               275
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               55, 44
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               226, 207
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 206
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               227, 99
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               228, 237
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 181
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 142
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 210
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               227, 232
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               2-451
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 232
               

               Conread position:
               3-279
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               226, 235
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               226, 235
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               214, 210
               

               Conread position:
               3-406
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               226, 200
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               225, 235
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 231
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 372
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               289
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               120, 127
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               225, 234
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               118, 140
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               67, 49
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               225, 235
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 204
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 208
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               225, 229
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               304
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               131, 135
               

               Conread position:
               4-451
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 234
               

               Conread position:
               5-451
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 115
               

               Conread position:
               6-451
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               441, 0
               

               Conread position:
               7-430
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 136
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               55, 63
               

               Conread position:
               7-452
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 131
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               288
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               122, 131
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               9-453
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-453
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               9-454
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               9-480
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 300
               

               Conread position:
               14-451
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 122
               

               Conread position:
               14-453
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               14-453
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 219
               

               Conread position:
               15-331
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               117, 123
               

               Conread position:
               15-442
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               225, 230
               

               Conread position:
               15-451
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               15-452
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               214, 223
               

               Conread position:
               15-452
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               277
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               213, 218
               

               Conread position:
               15-453
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 196
               

               Conread position:
               15-453
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-453
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               116, 123
               

               Conread position:
               16-480
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               114, 127
               

               Conread position:
               18-277
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               115, 120
               

               Conread position:
               18-454
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 123
               

               Conread position:
               19-453
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               45-451
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 193
               

               Conread position:
               48-451
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               63-453
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               166, 175
               

               Conread position:
               68-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               69-450
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 169
               

               Conread position:
               69-450
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               69-452
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-452
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               159, 164
               

               Conread position:
               69-453
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               160, 169
               

               Conread position:
               69-453
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-454
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               69-480
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               160, 169
               

               Conread position:
               72-453
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               75-417
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               229, 245
               

               Conread position:
               75-453
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-450
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               87-471
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-453
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-451
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               160, 146
               

               Conread position:
               141-454
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               244, 249
               

               Conread position:
               143-480
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-451
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               231-453
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               109, 0
               
Show alignments to all cow chromosomes.