Cow genome map

Conread name: Pla1-C0000039_P16

Conread position: 1-340
Cow position: chr14:25794501-25794160 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 69

Conread position: 1-445
Cow position: chr14:25859193-25859637 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 275
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 55, 44

Conread position: 1-446
Cow position: chr14:25784445-25784884 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 283
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 226, 207

Conread position: 1-451
Cow position: chr14:25783773-25784223 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 206

Conread position: 1-451
Cow position: chr14:25784193-25784644 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 38

Conread position: 1-452
Cow position: chr14:3101159-3100713 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 289
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 227, 99

Conread position: 1-452
Cow position: chr14:25794837-25794386 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 1-453
Cow position: chr14:3080333-3079881 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 273
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 228, 237

Conread position: 1-453
Cow position: chr14:25783689-25784141 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 181

Conread position: 1-453
Cow position: chr14:25784109-25784561 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 1-453
Cow position: chr14:25795005-25794553 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 142

Conread position: 1-453
Cow position: chr14:25836224-25836676 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 210

Conread position: 1-453
Cow position: chr14:25836392-25836844 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 281
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 227, 232

Conread position: 1-454
Cow position: chr14:25783521-25783975 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 42

Conread position: 2-451
Cow position: chr14:25783438-25783887 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 232

Conread position: 3-279
Cow position: chr14:680990-681266 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 67

Conread position: 3-325
Cow position: chr14:3156161-3156483 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 226, 235

Conread position: 3-367
Cow position: chr14:3080079-3079715 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 230
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 226, 235

Conread position: 3-367
Cow position: chr14:3155420-3155784 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 214, 210

Conread position: 3-406
Cow position: chr14:3127675-3127272 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 226, 200

Conread position: 3-430
Cow position: chr14:3101325-3100901 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 266
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 67

Conread position: 3-451
Cow position: chr14:3128179-3127730 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 278
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 225, 235

Conread position: 3-451
Cow position: chr14:25783607-25784055 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 3-451
Cow position: chr14:25783943-25784392 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 3-451
Cow position: chr14:25784027-25784475 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 3-451
Cow position: chr14:25795255-25794807 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 231

Conread position: 3-451
Cow position: chr14:25836058-25836507 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 372

Conread position: 3-451
Cow position: chr14:25859363-25859812 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 275
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 127, 140

Conread position: 3-451
Cow position: chr14:25859867-25860316 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 289
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 120, 127

Conread position: 3-451
Cow position: chr14:25860035-25860484 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 3-452
Cow position: chr14:3100826-3100377 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 279
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 225, 234

Conread position: 3-452
Cow position: chr14:3127759-3127310 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 284
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 140

Conread position: 3-452
Cow position: chr14:25836478-25836927 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 3-453
Cow position: chr14:3080247-3079797 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 282
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 67, 49

Conread position: 3-453
Cow position: chr14:3080751-3080301 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 225, 235

Conread position: 3-453
Cow position: chr14:25836730-25837180 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 204

Conread position: 3-455
Cow position: chr14:25784279-25784731 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 289
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 36

Conread position: 3-456
Cow position: chr14:25794919-25794466 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 208

Conread position: 3-456
Cow position: chr14:25836562-25837015 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 279
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 225, 229

Conread position: 3-480
Cow position: chr14:25876918-25877395 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 304
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 131, 135

Conread position: 4-451
Cow position: chr14:25794666-25794218 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 234

Conread position: 5-451
Cow position: chr14:25795421-25794975 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 115

Conread position: 6-451
Cow position: chr14:3080580-3080134 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 276
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 441, 0

Conread position: 7-430
Cow position: chr14:25895969-25896392 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 136

Conread position: 7-445
Cow position: chr14:25877174-25877612 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 273
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 55, 63

Conread position: 7-452
Cow position: chr14:25795167-25794722 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 131

Conread position: 7-453
Cow position: chr14:25836650-25837096 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 288
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 122, 131

Conread position: 7-453
Cow position: chr14:25860207-25860653 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 37

Conread position: 7-453
Cow position: chr14:25877258-25877704 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 9-453
Cow position: chr14:3127837-3127393 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-453
Cow position: chr14:25895467-25895911 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 273
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 53

Conread position: 9-454
Cow position: chr14:25876336-25876781 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 282
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 72, 91

Conread position: 9-480
Cow position: chr14:3127921-3127450 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 300

Conread position: 14-451
Cow position: chr14:25876425-25876863 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 122

Conread position: 14-453
Cow position: chr14:3080824-3080385 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 272
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 31

Conread position: 14-453
Cow position: chr14:3155920-3156359 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 219

Conread position: 15-331
Cow position: chr14:25836910-25837226 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 117, 123

Conread position: 15-442
Cow position: chr14:447696-448123 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 268
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 225, 230

Conread position: 15-451
Cow position: chr14:25876510-25876947 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 15-452
Cow position: chr14:680246-680683 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 257
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 214, 223

Conread position: 15-452
Cow position: chr14:25835986-25836423 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 277
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 213, 218

Conread position: 15-453
Cow position: chr14:25783367-25783805 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 196

Conread position: 15-453
Cow position: chr14:25836322-25836760 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-453
Cow position: chr14:25859711-25860149 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 123

Conread position: 16-480
Cow position: chr14:25859544-25860008 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 296
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 114, 127

Conread position: 18-277
Cow position: chr14:25911025-25911284 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 115, 120

Conread position: 18-454
Cow position: chr14:25859462-25859898 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 123

Conread position: 19-453
Cow position: chr14:3101058-3100628 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 275
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 30, 22

Conread position: 45-451
Cow position: chr14:25783901-25784307 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 193

Conread position: 48-451
Cow position: chr14:25795462-25795059 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 63-453
Cow position: chr14:447576-447966 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 166, 175

Conread position: 68-451
Cow position: chr14:25895694-25896078 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 238
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 72

Conread position: 69-450
Cow position: chr14:25860017-25860399 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 160, 169

Conread position: 69-450
Cow position: chr14:25910908-25911290 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 71

Conread position: 69-451
Cow position: chr14:25877068-25877451 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 69

Conread position: 69-452
Cow position: chr14:433887-434270 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 224
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 69-452
Cow position: chr14:25895611-25895994 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 228
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 159, 164

Conread position: 69-453
Cow position: chr14:3080097-3079713 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 160, 169

Conread position: 69-453
Cow position: chr14:3080601-3080217 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 69-454
Cow position: chr14:25910824-25911209 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 64, 74

Conread position: 69-480
Cow position: chr14:3080433-3080022 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 160, 169

Conread position: 72-453
Cow position: chr14:25835873-25836256 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 240
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 24

Conread position: 75-417
Cow position: chr14:25895197-25895539 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 229, 245

Conread position: 75-453
Cow position: chr14:3155408-3155786 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 77-450
Cow position: chr14:25876320-25876694 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 231
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 66

Conread position: 87-471
Cow position: chr14:680654-681038 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 102-453
Cow position: chr14:3128164-3127813 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 218
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 141-451
Cow position: chr14:25783325-25783635 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 160, 146

Conread position: 141-454
Cow position: chr14:447570-447883 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 244, 249

Conread position: 143-480
Cow position: chr14:3155881-3156218 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 216-451
Cow position: chr14:25783316-25783552 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 17

Conread position: 231-453
Cow position: chr14:3101432-3101211 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 109, 0

Show alignments to all cow chromosomes.