Cow genome map
| Conread name: | Pla1-C0000039_P16 |
| Conread position: | 1-356 |
| Cow position: | chr17:22551835-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 231 |
| Conread position: | 1-415 |
| Cow position: | chr17:22589589-22589175 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 207 |
| Conread position: | 1-423 |
| Cow position: | chr17:22473511-22473934 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 1-429 |
| Cow position: | chr17:22498966-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 1-452 |
| Cow position: | chr17:22589673-22589222 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 1-453 |
| Cow position: | chr17:22473427-22473879 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 202 |
| Conread position: | 1-453 |
| Cow position: | chr17:22552675-22552223 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 232 |
| Conread position: | 1-471 |
| Cow position: | chr17:22552423-22551953 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 1-478 |
| Cow position: | chr17:22590009-22589532 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-480 |
| Cow position: | chr17:22552003-22551524 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 235 |
| Conread position: | 1-480 |
| Cow position: | chr17:22552927-22552448 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 456 |
| Conread position: | 3-333 |
| Cow position: | chr17:22589503-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 135 |
| Conread position: | 3-440 |
| Cow position: | chr17:22551917-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 205 |
| Conread position: | 3-444 |
| Cow position: | chr17:22452202-22451761 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 205 |
| Conread position: | 3-448 |
| Cow position: | chr17:22452118-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 3-450 |
| Cow position: | chr17:22473345-22473793 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 199 |
| Conread position: | 3-451 |
| Cow position: | chr17:22499384-22498936 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 3-451 |
| Cow position: | chr17:22552505-22552057 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 208 |
| Conread position: | 3-451 |
| Cow position: | chr17:22552841-22552393 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-452 |
| Cow position: | chr17:22499300-22498851 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-453 |
| Cow position: | chr17:22499048-22498598 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-458 |
| Cow position: | chr17:22499132-22498676 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 235 |
| Conread position: | 3-460 |
| Cow position: | chr17:22552757-22552299 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 385 |
| Conread position: | 3-469 |
| Cow position: | chr17:22553093-22552627 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 233 |
| Conread position: | 3-472 |
| Cow position: | chr17:22552169-22551700 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-472 |
| Cow position: | chr17:22552253-22551784 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-472 |
| Cow position: | chr17:22552589-22552120 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 233 |
| Conread position: | 3-474 |
| Cow position: | chr17:22589755-22589284 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 373 |
| Conread position: | 3-478 |
| Cow position: | chr17:22452370-22451895 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 105 |
| Conread position: | 3-480 |
| Cow position: | chr17:22552085-22551608 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-480 |
| Cow position: | chr17:22553009-22552532 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-480 |
| Cow position: | chr17:22589923-22589446 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 200 |
| Conread position: | 3-480 |
| Cow position: | chr17:22590175-22589698 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 457 |
| Conread position: | 4-451 |
| Cow position: | chr17:22473262-22473709 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 367 |
| Conread position: | 4-464 |
| Cow position: | chr17:22499215-22498755 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-464 |
| Cow position: | chr17:22589838-22589378 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 308 |
| Conread position: | 5-478 |
| Cow position: | chr17:22590257-22589784 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 5-480 |
| Cow position: | chr17:22552335-22551860 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 7-472 |
| Cow position: | chr17:22553173-22552708 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 8-461 |
| Cow position: | chr17:22452281-22451828 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 106 |
| Conread position: | 9-480 |
| Cow position: | chr17:22590085-22589614 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-451 |
| Cow position: | chr17:22590312-22589895 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 57-459 |
| Cow position: | chr17:22452400-22451998 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 225 |
| Conread position: | 65-453 |
| Cow position: | chr17:22473242-22473627 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 21 |
| Conread position: | 112-480 |
| Cow position: | chr17:22452513-22452145 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 124 |
| Conread position: | 118-478 |
| Cow position: | chr17:22590312-22589952 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 255 |
| Conread position: | 133-480 |
| Cow position: | chr17:22452408-22452061 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 95, 100 |
| Conread position: | 162-480 |
| Cow position: | chr17:22499393-22499075 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 174-480 |
| Cow position: | chr17:22553174-22552868 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 233-479 |
| Cow position: | chr17:22473242-22473485 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 286-480 |
| Cow position: | chr17:22590312-22590118 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.