Cow genome map
| Conread name: | Pla1-C0000039_P16 |
| Conread position: | 1-368 |
| Cow position: | chr19:20678297-20678664 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 1-439 |
| Cow position: | chr19:23597291-23597730 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 374 |
| Conread position: | 1-448 |
| Cow position: | chr19:23649732-23650179 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 60, 66 |
| Conread position: | 1-451 |
| Cow position: | chr19:14940250-14940700 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 1-451 |
| Cow position: | chr19:20635623-20635173 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 1-451 |
| Cow position: | chr19:23614282-23614732 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 231 |
| Conread position: | 1-451 |
| Cow position: | chr19:43570214-43569764 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 206 |
| Conread position: | 1-452 |
| Cow position: | chr19:14959391-14958955 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 1-453 |
| Cow position: | chr19:14939998-14940450 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-453 |
| Cow position: | chr19:14960213-14959765 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 1-453 |
| Cow position: | chr19:20635539-20635087 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 142 |
| Conread position: | 1-453 |
| Cow position: | chr19:23649396-23649848 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-454 |
| Cow position: | chr19:20677877-20678330 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 204 |
| Conread position: | 1-460 |
| Cow position: | chr19:23614198-23614657 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 233 |
| Conread position: | 1-480 |
| Cow position: | chr19:23613442-23613921 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 135 |
| Conread position: | 1-480 |
| Cow position: | chr19:23613610-23614089 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 2-326 |
| Cow position: | chr19:43569961-43569641 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 128, 139 |
| Conread position: | 2-451 |
| Cow position: | chr19:23649901-23650350 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 47 |
| Conread position: | 3-328 |
| Cow position: | chr19:14960045-14959722 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 124, 105 |
| Conread position: | 3-331 |
| Cow position: | chr19:23597377-23597705 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-352 |
| Cow position: | chr19:20635369-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-431 |
| Cow position: | chr19:14940588-14941016 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-448 |
| Cow position: | chr19:43570128-43569687 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 117 |
| Conread position: | 3-449 |
| Cow position: | chr19:14959557-14959120 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 201 |
| Conread position: | 3-450 |
| Cow position: | chr19:23649986-23650434 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 135 |
| Conread position: | 3-451 |
| Cow position: | chr19:20678047-20678495 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 3-451 |
| Cow position: | chr19:20678215-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 374 |
| Conread position: | 3-451 |
| Cow position: | chr19:23597209-23597658 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 0 |
| Conread position: | 3-452 |
| Cow position: | chr19:23649482-23649931 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-453 |
| Cow position: | chr19:14940504-14940954 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-453 |
| Cow position: | chr19:14960379-14959931 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 3-453 |
| Cow position: | chr19:20677375-20677825 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 286 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 177, 181 |
| Conread position: | 3-453 |
| Cow position: | chr19:20677795-20678245 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-453 |
| Cow position: | chr19:20678131-20678581 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 145 |
| Conread position: | 3-453 |
| Cow position: | chr19:23614368-23614818 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-454 |
| Cow position: | chr19:20677963-20678414 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 3-454 |
| Cow position: | chr19:23613696-23614147 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 229 |
| Conread position: | 3-478 |
| Cow position: | chr19:14940336-14940811 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-479 |
| Cow position: | chr19:23613528-23614004 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 138 |
| Conread position: | 3-480 |
| Cow position: | chr19:23613360-23613837 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-480 |
| Cow position: | chr19:23613864-23614341 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 234 |
| Conread position: | 3-480 |
| Cow position: | chr19:23614032-23614509 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 3-480 |
| Cow position: | chr19:23614116-23614593 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 234 |
| Conread position: | 3-480 |
| Cow position: | chr19:23614536-23615013 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 231 |
| Conread position: | 3-480 |
| Cow position: | chr19:23614620-23615097 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 200 |
| Conread position: | 4-447 |
| Cow position: | chr19:14948453-14948011 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 49 |
| Conread position: | 4-451 |
| Cow position: | chr19:14940421-14940869 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 0 |
| Conread position: | 5-453 |
| Cow position: | chr19:23597043-23597491 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-452 |
| Cow position: | chr19:20677630-20678076 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 140 |
| Conread position: | 7-335 |
| Cow position: | chr19:23650158-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 7-436 |
| Cow position: | chr19:23614708-23615135 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 364 |
| Conread position: | 7-453 |
| Cow position: | chr19:20635701-20635255 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 7-480 |
| Cow position: | chr19:23613784-23614257 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 9-266 |
| Cow position: | chr19:14959062-14958805 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 157, 165 |
| Conread position: | 9-441 |
| Cow position: | chr19:23613954-23614386 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 10-452 |
| Cow position: | chr19:14959870-14959444 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 14-471 |
| Cow position: | chr19:23649577-23650034 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 221 |
| Conread position: | 15-400 |
| Cow position: | chr19:14940684-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 219 |
| Conread position: | 15-451 |
| Cow position: | chr19:14940180-14940616 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 218 |
| Conread position: | 15-453 |
| Cow position: | chr19:43570358-43569930 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 81 |
| Conread position: | 18-450 |
| Cow position: | chr19:23614467-23614899 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 353 |
| Conread position: | 18-452 |
| Cow position: | chr19:43570278-43569847 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 18-480 |
| Cow position: | chr19:14960448-14959988 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 50-454 |
| Cow position: | chr19:20635742-20635338 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 63-454 |
| Cow position: | chr19:23596852-23597240 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 165, 170 |
| Conread position: | 65-472 |
| Cow position: | chr19:14948476-14948070 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 163, 77 |
| Conread position: | 73-453 |
| Cow position: | chr19:14960477-14960099 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 130 |
| Conread position: | 75-446 |
| Cow position: | chr19:20636116-20635754 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 75-451 |
| Cow position: | chr19:14939988-14940365 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 0 |
| Conread position: | 77-420 |
| Cow position: | chr19:14959650-14959308 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 16 |
| Conread position: | 77-451 |
| Cow position: | chr19:23613350-23613724 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-459 |
| Cow position: | chr19:23596814-23597161 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 130-480 |
| Cow position: | chr19:14915851-14916199 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 134-480 |
| Cow position: | chr19:14939966-14940309 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 159-453 |
| Cow position: | chr19:23649302-23649596 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-454 |
| Cow position: | chr19:23613315-23613559 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-453 |
| Cow position: | chr19:23649281-23649512 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 241-480 |
| Cow position: | chr19:14960477-14960238 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 138, 130 |
Show alignments to all cow chromosomes.