Cow genome map
| Conread name: | Pla1-C0000039_P16 |
| Conread position: | 1-443 |
| Cow position: | chr2:5874670-5874228 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 1-453 |
| Cow position: | chr2:82799870-82800322 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 372 |
| Conread position: | 3-325 |
| Cow position: | chr2:82800124-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 182, 177 |
| Conread position: | 3-451 |
| Cow position: | chr2:86465192-86465640 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 290 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 127, 149 |
| Conread position: | 3-452 |
| Cow position: | chr2:78755930-78756376 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 184 |
| Conread position: | 3-453 |
| Cow position: | chr2:78755262-78755708 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 75 |
| Conread position: | 3-453 |
| Cow position: | chr2:82799536-82799986 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 3-453 |
| Cow position: | chr2:82799620-82800070 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 3-475 |
| Cow position: | chr2:78754689-78755146 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 3-479 |
| Cow position: | chr2:78755094-78755568 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-479 |
| Cow position: | chr2:78755178-78755652 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 3-479 |
| Cow position: | chr2:78755512-78755986 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 153 |
| Conread position: | 3-480 |
| Cow position: | chr2:78754842-78755319 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 229 |
| Conread position: | 3-480 |
| Cow position: | chr2:78755010-78755486 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 232 |
| Conread position: | 3-480 |
| Cow position: | chr2:78755762-78756240 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 4-442 |
| Cow position: | chr2:5875171-5874733 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-465 |
| Cow position: | chr2:86465109-86465570 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 4-480 |
| Cow position: | chr2:78754927-78755402 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 450, 410 |
| Conread position: | 5-287 |
| Cow position: | chr2:86465950-86466230 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 143, 139 |
| Conread position: | 5-453 |
| Cow position: | chr2:78754358-78754800 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 84 |
| Conread position: | 5-478 |
| Cow position: | chr2:78754109-78754577 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 35 |
| Conread position: | 5-480 |
| Cow position: | chr2:78754190-78754663 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 34 |
| Conread position: | 7-450 |
| Cow position: | chr2:82799708-82800152 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 7-453 |
| Cow position: | chr2:82799960-82800406 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 9-401 |
| Cow position: | chr2:82800046-82800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 9-464 |
| Cow position: | chr2:5875082-5874626 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 14-480 |
| Cow position: | chr2:78754533-78754983 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 158 |
| Conread position: | 15-451 |
| Cow position: | chr2:82799800-82800237 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 343, 352 |
| Conread position: | 15-452 |
| Cow position: | chr2:86465036-86465473 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 74, 63 |
| Conread position: | 63-442 |
| Cow position: | chr2:5874524-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 63-453 |
| Cow position: | chr2:86465672-86466062 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 66 |
| Conread position: | 65-480 |
| Cow position: | chr2:78754820-78755235 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 168 |
| Conread position: | 66-447 |
| Cow position: | chr2:5874689-5874307 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 77-442 |
| Cow position: | chr2:5874846-5874481 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 79-473 |
| Cow position: | chr2:5875180-5874786 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 159 |
| Conread position: | 186-451 |
| Cow position: | chr2:82799467-82799733 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 207-451 |
| Cow position: | chr2:82799402-82799649 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 25 |
Show alignments to all cow chromosomes.