Cow genome map

Conread name: Pla1-C0000039_P16

Conread position: 1-250
Cow position: chr22:12499718-12499967 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-332
Cow position: chr22:12385238-12384907 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 142

Conread position: 1-333
Cow position: chr22:12458096-12457762 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 325, 0

Conread position: 1-446
Cow position: chr22:12385492-12385045 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 1-451
Cow position: chr22:12399500-12399049 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 1-451
Cow position: chr22:12432404-12431954 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 210

Conread position: 1-451
Cow position: chr22:12499382-12499832 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 1-453
Cow position: chr22:12475961-12475509 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 124

Conread position: 1-453
Cow position: chr22:12476213-12475761 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 1-453
Cow position: chr22:12499046-12499498 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 34

Conread position: 1-454
Cow position: chr22:12399584-12399131 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 207

Conread position: 1-459
Cow position: chr22:12432320-12431862 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 237

Conread position: 1-472
Cow position: chr22:12385660-12385187 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 211

Conread position: 1-478
Cow position: chr22:12475877-12475400 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 40

Conread position: 1-479
Cow position: chr22:12431732-12431254 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 464

Conread position: 1-479
Cow position: chr22:12432236-12431758 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 42

Conread position: 1-480
Cow position: chr22:12431312-12430833 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 232

Conread position: 1-480
Cow position: chr22:12431816-12431337 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 211

Conread position: 1-480
Cow position: chr22:12432068-12431589 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 2-419
Cow position: chr22:12458179-12457760 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 141

Conread position: 3-168
Cow position: chr22:12475455-12475290 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-250
Cow position: chr22:12475539-12475292 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 42

Conread position: 3-315
Cow position: chr22:12399078-12398766 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-422
Cow position: chr22:11641036-11641455 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 235

Conread position: 3-444
Cow position: chr22:12385320-12384880 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 390

Conread position: 3-446
Cow position: chr22:12399246-12398803 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 111

Conread position: 3-451
Cow position: chr22:12399414-12398966 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 3-451
Cow position: chr22:12399666-12399218 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 229

Conread position: 3-451
Cow position: chr22:12431226-12430778 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-451
Cow position: chr22:14429656-14430104 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 282
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 13

Conread position: 3-452
Cow position: chr22:12399330-12398881 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 230

Conread position: 3-452
Cow position: chr22:12419017-12418568 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-452
Cow position: chr22:14430160-14430609 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 276
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 40

Conread position: 3-453
Cow position: chr22:11640868-11641318 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 205

Conread position: 3-453
Cow position: chr22:12385404-12384954 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 34

Conread position: 3-453
Cow position: chr22:12385574-12385122 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 39

Conread position: 3-453
Cow position: chr22:12458346-12457896 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 230

Conread position: 3-453
Cow position: chr22:12498964-12499414 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-453
Cow position: chr22:12499132-12499582 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 118

Conread position: 3-453
Cow position: chr22:14429992-14430442 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 208

Conread position: 3-453
Cow position: chr22:46654359-46654809 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 293
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 34

Conread position: 3-454
Cow position: chr22:14429824-14430275 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 3-454
Cow position: chr22:14467985-14468436 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 380

Conread position: 3-478
Cow position: chr22:12431982-12431507 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Conread position: 3-478
Cow position: chr22:12432486-12432011 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 230

Conread position: 3-480
Cow position: chr22:12431478-12431001 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 34

Conread position: 3-480
Cow position: chr22:12431898-12431421 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 3-480
Cow position: chr22:12458514-12458037 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-480
Cow position: chr22:12458598-12458121 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 3-480
Cow position: chr22:12476043-12475566 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 3-480
Cow position: chr22:12476127-12475650 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 230

Conread position: 3-480
Cow position: chr22:12476295-12475818 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 456

Conread position: 3-480
Cow position: chr22:12476379-12475902 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 466

Conread position: 3-480
Cow position: chr22:12498880-12499357 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 361

Conread position: 4-453
Cow position: chr22:14430077-14430526 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 299
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 126, 134

Conread position: 5-460
Cow position: chr22:46654025-46654480 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 30

Conread position: 7-404
Cow position: chr22:12399158-12398762 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 0

Conread position: 7-442
Cow position: chr22:12399908-12399479 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 69

Conread position: 7-453
Cow position: chr22:11666461-11666907 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 279
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 106

Conread position: 7-453
Cow position: chr22:11701115-11701561 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 268
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 221, 231

Conread position: 7-453
Cow position: chr22:12475787-12475341 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 226

Conread position: 7-480
Cow position: chr22:12431138-12430665 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-431
Cow position: chr22:11666547-11666968 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 265
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 26

Conread position: 9-448
Cow position: chr22:12458256-12457817 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 224

Conread position: 9-451
Cow position: chr22:12499474-12499917 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 224

Conread position: 9-453
Cow position: chr22:11701201-11701645 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 26

Conread position: 9-454
Cow position: chr22:12418927-12418482 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-480
Cow position: chr22:12458424-12457953 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 224

Conread position: 15-447
Cow position: chr22:12431382-12430950 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 15-453
Cow position: chr22:11640796-11641234 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 15-470
Cow position: chr22:12399822-12399367 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 105

Conread position: 15-480
Cow position: chr22:11640964-11641429 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 223

Conread position: 15-480
Cow position: chr22:12499312-12499777 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 106

Conread position: 18-451
Cow position: chr22:12399735-12399302 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 41-451
Cow position: chr22:46653977-46654387 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 156, 176

Conread position: 56-447
Cow position: chr22:12544896-12545287 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 240
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 87

Conread position: 62-478
Cow position: chr22:12476487-12476072 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 57, 10

Conread position: 63-454
Cow position: chr22:14429464-14429855 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 246
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 66

Conread position: 63-454
Cow position: chr22:14429800-14430191 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 258
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 172, 140

Conread position: 65-453
Cow position: chr22:14429553-14429938 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 252
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 77, 54

Conread position: 74-478
Cow position: chr22:12432499-12432095 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 305

Conread position: 75-443
Cow position: chr22:12498868-12499236 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 75-480
Cow position: chr22:12476391-12475986 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 79-453
Cow position: chr22:14467977-14468351 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 234
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 224, 243

Conread position: 81-480
Cow position: chr22:12399918-12399525 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 79

Conread position: 87-453
Cow position: chr22:12419017-12418651 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 146

Conread position: 91-453
Cow position: chr22:11666461-11666823 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 129, 112

Conread position: 129-453
Cow position: chr22:11640574-11640898 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 104

Conread position: 134-451
Cow position: chr22:12385695-12385376 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 16

Conread position: 141-478
Cow position: chr22:12498850-12499187 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 92

Conread position: 142-480
Cow position: chr22:12458627-12458289 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 240-472
Cow position: chr22:12385675-12385441 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 6, 140

Conread position: 300-478
Cow position: chr22:12498841-12499019 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.