Cow genome map


           Conread name:
           Pla1-C0000039_P16
        

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 142
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 123
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 237
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               2-310
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               226, 230
               

               Conread position:
               3-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               208, 190
               

               Conread position:
               3-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               186, 208
               

               Conread position:
               3-339
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               3-353
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 0
               

               Conread position:
               3-409
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               3-450
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 229
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 230
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 122
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 75
               

               Conread position:
               3-473
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 230
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 201
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               4-430
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 228
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               4-480
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               7-452
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               7-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 136
               

               Conread position:
               9-400
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-450
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               9-451
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               9-454
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               430, 0
               

               Conread position:
               9-480
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               14-451
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 16
               

               Conread position:
               14-452
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 152
               

               Conread position:
               14-452
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               15-452
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 125
               

               Conread position:
               15-480
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 218
               

               Conread position:
               17-453
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               64-480
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 182
               

               Conread position:
               72-480
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 151
               

               Conread position:
               73-453
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 133
               

               Conread position:
               76-453
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               295, 317
               

               Conread position:
               99-451
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               123-480
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               118, 42
               

               Conread position:
               141-451
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               71, 62
               

               Conread position:
               141-480
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               87, 97
               

               Conread position:
               157-451
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-442
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               240-453
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               241-480
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-453
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-452
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.