Cow genome map


           Conread name:
           Pla1-C0000039_P16
        

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               227, 233
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               1-366
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 124
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               132, 147
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 38
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 237
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 232
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 237
               

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 195
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 383
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               2-430
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 229
               

               Conread position:
               3-443
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 235
               

               Conread position:
               3-443
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 232
               

               Conread position:
               3-445
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 201
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 372
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 203
               

               Conread position:
               3-450
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 138
               

               Conread position:
               3-450
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 202
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 230
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 231
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 39
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               225, 234
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 230
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 375
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 213
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 129
               

               Conread position:
               3-473
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 204
               

               Conread position:
               3-479
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               3-479
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 372
               

               Conread position:
               5-472
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 130
               

               Conread position:
               6-452
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               6-478
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 21
               

               Conread position:
               7-193
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               9-430
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 365
               

               Conread position:
               9-480
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               232, 68
               

               Conread position:
               9-480
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 223
               

               Conread position:
               11-453
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               13-419
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               108, 118
               

               Conread position:
               14-453
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               14-474
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 122
               

               Conread position:
               15-478
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 202
               

               Conread position:
               15-480
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 218
               

               Conread position:
               17-465
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               103, 91
               

               Conread position:
               18-451
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               174, 197
               

               Conread position:
               18-452
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               148, 155
               

               Conread position:
               42-480
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               275
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-480
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               310, 81
               

               Conread position:
               63-453
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 175
               

               Conread position:
               63-471
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 173
               

               Conread position:
               65-480
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               163, 5
               

               Conread position:
               68-453
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 139
               

               Conread position:
               72-480
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 90
               

               Conread position:
               73-416
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               75-448
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               120, 133
               

               Conread position:
               75-478
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 163
               

               Conread position:
               75-480
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               247, 51
               

               Conread position:
               77-407
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               103, 108
               

               Conread position:
               78-461
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-452
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               81-453
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 152
               

               Conread position:
               92-478
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 146
               

               Conread position:
               133-453
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               141-420
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               52, 65
               

               Conread position:
               141-453
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               142-453
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 151
               

               Conread position:
               144-431
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               146-453
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               153-473
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 231
               

               Conread position:
               156-451
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               161-460
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               231-430
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               260-480
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.