Cow genome map
| Conread name: | Pla1-C0000039_P16 |
| Conread position: | 1-333 |
| Cow position: | chr3:77350905-77350576 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 1-367 |
| Cow position: | chr3:68027351-68027717 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 140, 113 |
| Conread position: | 1-421 |
| Cow position: | chr3:62742621-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 20 |
| Conread position: | 1-451 |
| Cow position: | chr3:62722150-62721699 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 1-459 |
| Cow position: | chr3:62722234-62721776 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 1-480 |
| Cow position: | chr3:62722318-62721839 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 237 |
| Conread position: | 2-453 |
| Cow position: | chr3:62742454-62742901 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 209, 187 |
| Conread position: | 3-291 |
| Cow position: | chr3:62743185-62743474 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 225, 231 |
| Conread position: | 3-314 |
| Cow position: | chr3:62721896-62721585 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 3-451 |
| Cow position: | chr3:62742539-62742983 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 102 |
| Conread position: | 3-451 |
| Cow position: | chr3:68027185-68027634 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 438, 0 |
| Conread position: | 3-451 |
| Cow position: | chr3:68045610-68046059 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 3-480 |
| Cow position: | chr3:62722064-62721587 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 3-480 |
| Cow position: | chr3:77351064-77350597 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 5-453 |
| Cow position: | chr3:68027019-68027467 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 5-453 |
| Cow position: | chr3:68027271-68027719 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 5-453 |
| Cow position: | chr3:68045780-68046228 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-247 |
| Cow position: | chr3:68046118-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 8-451 |
| Cow position: | chr3:68027106-68027549 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 143 |
| Conread position: | 8-451 |
| Cow position: | chr3:68045699-68046142 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 9-415 |
| Cow position: | chr3:68045952-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 14-460 |
| Cow position: | chr3:62743033-62743474 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 83 |
| Conread position: | 16-453 |
| Cow position: | chr3:62722387-62721950 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 16-453 |
| Cow position: | chr3:68045875-68046312 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 35-453 |
| Cow position: | chr3:68026804-68027215 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 38-451 |
| Cow position: | chr3:68045561-68045975 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 56-415 |
| Cow position: | chr3:77350934-77350578 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 323, 226 |
| Conread position: | 100-459 |
| Cow position: | chr3:62722387-62722028 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 123-451 |
| Cow position: | chr3:68026969-68027297 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 123-453 |
| Cow position: | chr3:68045562-68045892 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 271, 248 |
| Conread position: | 131-453 |
| Cow position: | chr3:62742248-62742569 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 246, 105 |
| Conread position: | 184-450 |
| Cow position: | chr3:77351302-77351037 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 184-480 |
| Cow position: | chr3:62722387-62722091 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 49 |
Show alignments to all cow chromosomes.