Cow genome map
| Conread name: | Pla1-C0000039_P16 |
| Conread position: | 1-328 |
| Cow position: | chr7:11600760-11600432 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 229, 202 |
| Conread position: | 1-335 |
| Cow position: | chr7:3180544-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 231 |
| Conread position: | 1-380 |
| Cow position: | chr7:1439898-1440276 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-408 |
| Cow position: | chr7:42878681-42878274 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 236 |
| Conread position: | 1-451 |
| Cow position: | chr7:1014778-1015228 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 138 |
| Conread position: | 1-451 |
| Cow position: | chr7:1438174-1438622 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 1-451 |
| Cow position: | chr7:3179872-3180322 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 142 |
| Conread position: | 1-451 |
| Cow position: | chr7:8325244-8325694 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 1-452 |
| Cow position: | chr7:8324992-8325443 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 1-452 |
| Cow position: | chr7:18390001-18390452 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 135 |
| Conread position: | 1-453 |
| Cow position: | chr7:3180292-3180744 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 150 |
| Conread position: | 1-453 |
| Cow position: | chr7:8243477-8243929 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 1-453 |
| Cow position: | chr7:8277771-8278223 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 129 |
| Conread position: | 1-454 |
| Cow position: | chr7:8243142-8243595 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 1-454 |
| Cow position: | chr7:8324740-8325193 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 1-459 |
| Cow position: | chr7:3180208-3180666 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-461 |
| Cow position: | chr7:18390337-18390796 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 453, 0 |
| Conread position: | 1-461 |
| Cow position: | chr7:42878933-42878473 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 207 |
| Conread position: | 1-480 |
| Cow position: | chr7:1014862-1015341 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 134 |
| Conread position: | 1-480 |
| Cow position: | chr7:42879101-42878622 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 375 |
| Conread position: | 3-199 |
| Cow position: | chr7:8325918-8326114 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 127 |
| Conread position: | 3-331 |
| Cow position: | chr7:1015116-1015444 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 3-417 |
| Cow position: | chr7:3180462-3180875 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 47 |
| Conread position: | 3-445 |
| Cow position: | chr7:3179790-3180232 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-452 |
| Cow position: | chr7:3179958-3180407 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-453 |
| Cow position: | chr7:1014450-1014894 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 299, 195 |
| Conread position: | 3-453 |
| Cow position: | chr7:1014948-1015398 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 3-453 |
| Cow position: | chr7:3180042-3180492 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 229 |
| Conread position: | 3-453 |
| Cow position: | chr7:8277353-8277803 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 3-453 |
| Cow position: | chr7:8277941-8278391 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 3-453 |
| Cow position: | chr7:8324826-8325276 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 3-453 |
| Cow position: | chr7:8325078-8325528 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 3-453 |
| Cow position: | chr7:11601094-11600644 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-453 |
| Cow position: | chr7:18390171-18390621 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 3-454 |
| Cow position: | chr7:8277437-8277888 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 3-455 |
| Cow position: | chr7:11601010-11600557 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 0 |
| Conread position: | 3-464 |
| Cow position: | chr7:1439817-1440276 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 42 |
| Conread position: | 3-473 |
| Cow position: | chr7:3180126-3180596 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 391 |
| Conread position: | 3-473 |
| Cow position: | chr7:42879183-42878713 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-480 |
| Cow position: | chr7:42878847-42878370 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 205 |
| Conread position: | 3-480 |
| Cow position: | chr7:42879015-42878538 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 373 |
| Conread position: | 4-439 |
| Cow position: | chr7:11600841-11600411 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 413 |
| Conread position: | 4-451 |
| Cow position: | chr7:11601177-11600729 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 278 |
| Conread position: | 4-480 |
| Cow position: | chr7:42879434-42878958 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 5-453 |
| Cow position: | chr7:18390257-18390705 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 7-461 |
| Cow position: | chr7:3180382-3180834 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 132 |
| Conread position: | 7-462 |
| Cow position: | chr7:1015036-1015492 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 134 |
| Conread position: | 7-480 |
| Cow position: | chr7:42878759-42878286 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 15-303 |
| Cow position: | chr7:1438438-1438726 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 15-453 |
| Cow position: | chr7:1014708-1015146 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 16-368 |
| Cow position: | chr7:1438355-1438707 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 182, 192 |
| Conread position: | 17-479 |
| Cow position: | chr7:42879253-42878791 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 18-451 |
| Cow position: | chr7:3179721-3180154 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 215 |
| Conread position: | 24-451 |
| Cow position: | chr7:1438279-1438706 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 173, 185 |
| Conread position: | 57-451 |
| Cow position: | chr7:8243701-8244092 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 57-453 |
| Cow position: | chr7:8277323-8277719 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 73, 81 |
| Conread position: | 57-454 |
| Cow position: | chr7:8325552-8325949 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 157 |
| Conread position: | 63-453 |
| Cow position: | chr7:11600866-11600476 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-453 |
| Cow position: | chr7:11601202-11600812 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 316, 302 |
| Conread position: | 65-452 |
| Cow position: | chr7:1439457-1439846 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 140 |
| Conread position: | 70-453 |
| Cow position: | chr7:18389986-18390369 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 97, 115 |
| Conread position: | 72-453 |
| Cow position: | chr7:11434822-11434448 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 78-480 |
| Cow position: | chr7:42879276-42878874 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 155 |
| Conread position: | 83-454 |
| Cow position: | chr7:8242804-8243175 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 129-440 |
| Cow position: | chr7:11601218-11600909 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 141-453 |
| Cow position: | chr7:1014168-1014480 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 141-471 |
| Cow position: | chr7:18389973-18390303 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 245, 230 |
| Conread position: | 143-480 |
| Cow position: | chr7:1014668-1015005 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-453 |
| Cow position: | chr7:8324730-8325024 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 165-451 |
| Cow position: | chr7:3179700-3179986 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 227-452 |
| Cow position: | chr7:1439452-1439674 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 294-480 |
| Cow position: | chr7:3179745-3179931 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.