Cow genome map
Conread name: | Pla1-C0000039_P16 |
Conread position: | 1-315 |
Cow position: | chr8:46817060-46817374 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 189 |
Conread position: | 1-441 |
Cow position: | chr8:48406699-48406259 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 283 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 57, 51 |
Conread position: | 1-451 |
Cow position: | chr8:48406951-48406500 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 46 |
Conread position: | 1-464 |
Cow position: | chr8:46816220-46816683 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-480 |
Cow position: | chr8:45201193-45201672 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-480 |
Cow position: | chr8:46816724-46817203 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 105 |
Conread position: | 2-409 |
Cow position: | chr8:46816977-46817384 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 378 |
Conread position: | 2-480 |
Cow position: | chr8:46816557-46817035 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 232 |
Conread position: | 3-436 |
Cow position: | chr8:48407201-48406768 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 37 |
Conread position: | 3-453 |
Cow position: | chr8:46816390-46816840 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-453 |
Cow position: | chr8:55581083-55581533 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 140 |
Conread position: | 3-460 |
Cow position: | chr8:55581251-55581708 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 229 |
Conread position: | 3-464 |
Cow position: | chr8:46816642-46817103 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 136 |
Conread position: | 3-471 |
Cow position: | chr8:45201531-45201999 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 230 |
Conread position: | 3-478 |
Cow position: | chr8:46815883-46816361 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 234 |
Conread position: | 3-478 |
Cow position: | chr8:46816138-46816613 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 231 |
Conread position: | 3-480 |
Cow position: | chr8:45201111-45201588 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-480 |
Cow position: | chr8:45201363-45201840 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-480 |
Cow position: | chr8:45201447-45201924 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 230 |
Conread position: | 3-480 |
Cow position: | chr8:46816474-46816951 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 304 |
Conread position: | 3-480 |
Cow position: | chr8:46816894-46817371 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 37 |
Conread position: | 3-480 |
Cow position: | chr8:48407453-48406976 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 140 |
Conread position: | 4-451 |
Cow position: | chr8:48407284-48406837 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 139 |
Conread position: | 4-453 |
Cow position: | chr8:48407116-48406667 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 33 |
Conread position: | 4-480 |
Cow position: | chr8:46815971-46816447 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 460, 451 |
Conread position: | 4-480 |
Cow position: | chr8:48407620-48407144 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 229 |
Conread position: | 5-451 |
Cow position: | chr8:45201029-45201475 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-453 |
Cow position: | chr8:45201281-45201729 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-480 |
Cow position: | chr8:46816056-46816531 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 227 |
Conread position: | 7-456 |
Cow position: | chr8:55580835-55581284 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 42 |
Conread position: | 7-480 |
Cow position: | chr8:45200779-45201252 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 227 |
Conread position: | 9-450 |
Cow position: | chr8:48407027-48406585 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 284 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 194, 199 |
Conread position: | 9-451 |
Cow position: | chr8:55580921-55581363 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 223 |
Conread position: | 9-464 |
Cow position: | chr8:45200949-45201404 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 223 |
Conread position: | 14-452 |
Cow position: | chr8:46816821-46817259 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 284 |
Conread position: | 14-452 |
Cow position: | chr8:55581010-55581448 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 218 |
Conread position: | 15-480 |
Cow position: | chr8:46816318-46816783 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 219 |
Conread position: | 18-469 |
Cow position: | chr8:55581182-55581633 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 215 |
Conread position: | 45-453 |
Cow position: | chr8:45200899-45201309 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 63-450 |
Cow position: | chr8:48407309-48406921 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 145 |
Conread position: | 63-480 |
Cow position: | chr8:48407645-48407228 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 170 |
Conread position: | 64-453 |
Cow position: | chr8:55580808-55581197 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 251 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 56, 79 |
Conread position: | 67-480 |
Cow position: | chr8:46815863-46816279 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 78-451 |
Cow position: | chr8:48406706-48406332 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 239 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 118, 130 |
Conread position: | 99-451 |
Cow position: | chr8:6958059-6957707 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 241 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 31, 44 |
Conread position: | 134-450 |
Cow position: | chr8:48407658-48407341 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 207 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 311, 0 |
Show alignments to all cow chromosomes.