Cow genome map
| Conread name: | Pla1-C0000039_P16 |
| Conread position: | 1-429 |
| Cow position: | chrX:29045085-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 207 |
| Conread position: | 1-439 |
| Cow position: | chrX:25324656-25324220 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 233 |
| Conread position: | 1-473 |
| Cow position: | chrX:25325412-25324940 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 232 |
| Conread position: | 1-474 |
| Cow position: | chrX:25325160-25324687 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 1-480 |
| Cow position: | chrX:25325076-25324597 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 233 |
| Conread position: | 1-480 |
| Cow position: | chrX:25325580-25325101 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 462 |
| Conread position: | 1-480 |
| Cow position: | chrX:29045652-29045194 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 202 |
| Conread position: | 2-480 |
| Cow position: | chrX:25325747-25325269 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 142 |
| Conread position: | 2-480 |
| Cow position: | chrX:29045252-29044774 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 374 |
| Conread position: | 3-357 |
| Cow position: | chrX:29045734-29045380 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 229 |
| Conread position: | 3-433 |
| Cow position: | chrX:25310151-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 3-451 |
| Cow position: | chrX:12627615-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 3-453 |
| Cow position: | chrX:13826771-13826321 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 3-453 |
| Cow position: | chrX:25309815-25310265 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 3-459 |
| Cow position: | chrX:25310067-25310524 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 3-480 |
| Cow position: | chrX:25309983-25310460 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 296 |
| Conread position: | 3-480 |
| Cow position: | chrX:25324822-25324345 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-480 |
| Cow position: | chrX:25324906-25324429 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-480 |
| Cow position: | chrX:25325242-25324765 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 140 |
| Conread position: | 3-480 |
| Cow position: | chrX:25325326-25324849 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-480 |
| Cow position: | chrX:25325494-25325017 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 3-480 |
| Cow position: | chrX:29045167-29044690 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 230 |
| Conread position: | 4-460 |
| Cow position: | chrX:25325661-25325204 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 0 |
| Conread position: | 5-453 |
| Cow position: | chrX:25309901-25310349 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 379 |
| Conread position: | 5-460 |
| Cow position: | chrX:25309733-25310189 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 227 |
| Conread position: | 5-480 |
| Cow position: | chrX:29045333-29044858 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 14-480 |
| Cow position: | chrX:25324727-25324261 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 220 |
| Conread position: | 15-472 |
| Cow position: | chrX:25324978-25324521 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 218 |
| Conread position: | 16-451 |
| Cow position: | chrX:25309660-25310095 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 56-451 |
| Cow position: | chrX:29045849-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 92 |
| Conread position: | 57-447 |
| Cow position: | chrX:25325776-25325386 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-456 |
| Cow position: | chrX:12627334-12627731 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 62-415 |
| Cow position: | chrX:29045759-29045408 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 309 |
| Conread position: | 67-451 |
| Cow position: | chrX:25325850-25325466 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 74-368 |
| Cow position: | chrX:12627769-12628063 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 97-453 |
| Cow position: | chrX:13826929-13826573 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 115, 120 |
| Conread position: | 100-480 |
| Cow position: | chrX:25309660-25310040 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 230-472 |
| Cow position: | chrX:29045759-29045517 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-480 |
| Cow position: | chrX:25325771-25325521 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 129, 137 |
| Conread position: | 235-474 |
| Cow position: | chrX:29045838-29045599 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.