Cow genome map
| Conread name: | Pla1-C0000048_H07 |
| Conread position: | 103-332 |
| Cow position: | chr23:24522398-24522168 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 103-391 |
| Cow position: | chr23:24535791-24535503 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 217, 201 |
| Conread position: | 103-394 |
| Cow position: | chr23:24546992-24546701 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 128, 115 |
| Conread position: | 103-442 |
| Cow position: | chr23:24560468-24560129 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 200, 217 |
| Conread position: | 103-447 |
| Cow position: | chr23:25626284-25626625 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 157, 152 |
| Conread position: | 103-463 |
| Cow position: | chr23:24547160-24546800 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 103-466 |
| Cow position: | chr23:24522566-24522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 197, 203 |
| Conread position: | 103-466 |
| Cow position: | chr23:24547076-24546713 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 103-466 |
| Cow position: | chr23:24547244-24546881 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 200, 204 |
| Conread position: | 103-466 |
| Cow position: | chr23:24560636-24560273 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 103-466 |
| Cow position: | chr23:24560804-24560441 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 292, 286 |
| Conread position: | 103-466 |
| Cow position: | chr23:24560888-24560525 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 38 |
| Conread position: | 103-466 |
| Cow position: | chr23:24639554-24639917 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 103-466 |
| Cow position: | chr23:25660153-25660516 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 220, 197 |
| Conread position: | 104-393 |
| Cow position: | chr23:25660404-25660694 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 210 |
| Conread position: | 105-431 |
| Cow position: | chr23:25698652-25698326 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 105-465 |
| Cow position: | chr23:24536041-24535681 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 160, 138 |
| Conread position: | 105-466 |
| Cow position: | chr23:24639388-24639749 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 290, 280 |
| Conread position: | 111-467 |
| Cow position: | chr23:24626318-24626674 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 112-466 |
| Cow position: | chr23:24547319-24546965 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 116-467 |
| Cow position: | chr23:24639651-24640002 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 117-399 |
| Cow position: | chr23:25724111-25723829 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 122-394 |
| Cow position: | chr23:24654054-24654326 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 119, 99 |
| Conread position: | 122-431 |
| Cow position: | chr23:24626413-24626722 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 254, 250 |
| Conread position: | 122-462 |
| Cow position: | chr23:24639741-24640081 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 105, 96 |
| Conread position: | 122-467 |
| Cow position: | chr23:24639489-24639834 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 123-431 |
| Cow position: | chr23:25724021-25723713 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 99, 93 |
| Conread position: | 123-466 |
| Cow position: | chr23:24560700-24560357 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 285, 262 |
| Conread position: | 123-467 |
| Cow position: | chr23:25626136-25626480 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 283, 275 |
| Conread position: | 133-466 |
| Cow position: | chr23:24626257-24626589 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 141-466 |
| Cow position: | chr23:25660361-25660684 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 268, 11 |
Show alignments to all cow chromosomes.