Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-279 |
| Cow position: | chr1:73522404-73522123 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 1-369 |
| Cow position: | chr1:29916154-29916530 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 131, 27 |
| Conread position: | 1-380 |
| Cow position: | chr1:31499363-31499755 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 143, 81 |
| Conread position: | 1-397 |
| Cow position: | chr1:26688743-26688326 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 1-403 |
| Cow position: | chr1:3657631-3657213 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 1-410 |
| Cow position: | chr1:35844194-35843766 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 84 |
| Conread position: | 1-424 |
| Cow position: | chr1:23041311-23041743 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 1-424 |
| Cow position: | chr1:41735889-41735450 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 83 |
| Conread position: | 1-424 |
| Cow position: | chr1:57119608-57119167 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 1-424 |
| Cow position: | chr1:66355973-66355539 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 2-346 |
| Cow position: | chr1:15307771-15308129 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 80 |
| Conread position: | 3-347 |
| Cow position: | chr1:86325873-86325508 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 128, 79 |
| Conread position: | 3-386 |
| Cow position: | chr1:31190366-31189977 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 96 |
| Conread position: | 3-409 |
| Cow position: | chr1:80764797-80764375 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 81 |
| Conread position: | 3-424 |
| Cow position: | chr1:90423348-90422913 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 73 |
| Conread position: | 4-369 |
| Cow position: | chr1:11020774-11021134 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 119, 80 |
| Conread position: | 4-377 |
| Cow position: | chr1:10064238-10063853 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 4-409 |
| Cow position: | chr1:56643849-56643444 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 4-421 |
| Cow position: | chr1:22777814-22777371 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 4-424 |
| Cow position: | chr1:77118787-77118354 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 165, 38 |
| Conread position: | 5-358 |
| Cow position: | chr1:92642697-92642341 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 124, 23 |
| Conread position: | 5-409 |
| Cow position: | chr1:31871160-31871588 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 79 |
| Conread position: | 5-414 |
| Cow position: | chr1:31390844-31390423 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 29 |
| Conread position: | 5-424 |
| Cow position: | chr1:97622456-97622040 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 6-369 |
| Cow position: | chr1:61661564-61661208 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 6-388 |
| Cow position: | chr1:25183866-25184249 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 136, 78 |
| Conread position: | 6-409 |
| Cow position: | chr1:89547960-89548347 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 7-270 |
| Cow position: | chr1:82370493-82370759 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 65 |
| Conread position: | 7-289 |
| Cow position: | chr1:12871265-12870975 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 123, 81 |
| Conread position: | 7-368 |
| Cow position: | chr1:30413327-30413708 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 7-412 |
| Cow position: | chr1:23099639-23100064 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 8-363 |
| Cow position: | chr1:6795193-6794813 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 9-381 |
| Cow position: | chr1:10719742-10719349 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 9-405 |
| Cow position: | chr1:29975853-29975451 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 9-424 |
| Cow position: | chr1:46839338-46839788 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 124, 78 |
| Conread position: | 9-424 |
| Cow position: | chr1:61736847-61737276 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 10-398 |
| Cow position: | chr1:28678283-28678670 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 11-289 |
| Cow position: | chr1:57635213-57635496 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 11-291 |
| Cow position: | chr1:25087752-25087470 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 71 |
| Conread position: | 11-360 |
| Cow position: | chr1:2765163-2765523 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 11-369 |
| Cow position: | chr1:5162307-5161935 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 73 |
| Conread position: | 11-374 |
| Cow position: | chr1:20377583-20377221 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 11-409 |
| Cow position: | chr1:30066385-30066781 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 11-420 |
| Cow position: | chr1:95765343-95764917 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 71 |
| Conread position: | 11-421 |
| Cow position: | chr1:70534188-70533766 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 73 |
| Conread position: | 13-180 |
| Cow position: | chr1:14379782-14379619 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 66 |
| Conread position: | 13-404 |
| Cow position: | chr1:74947369-74946964 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 15-175 |
| Cow position: | chr1:81563483-81563647 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 15-347 |
| Cow position: | chr1:75443667-75443335 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 117, 69 |
| Conread position: | 15-349 |
| Cow position: | chr1:7143099-7142752 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 15-398 |
| Cow position: | chr1:71135903-71136299 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 15-404 |
| Cow position: | chr1:78791557-78791154 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 16-191 |
| Cow position: | chr1:44136711-44136536 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 161, 66 |
| Conread position: | 16-409 |
| Cow position: | chr1:25793689-25793279 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 16-424 |
| Cow position: | chr1:52415208-52414795 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 19-419 |
| Cow position: | chr1:81319044-81319452 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 19-424 |
| Cow position: | chr1:51256789-51257194 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 6, 52 |
| Conread position: | 20-384 |
| Cow position: | chr1:63314617-63314965 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 24-385 |
| Cow position: | chr1:62732334-62732705 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 24-398 |
| Cow position: | chr1:64189261-64189648 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 25-290 |
| Cow position: | chr1:8869904-8869624 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 26-258 |
| Cow position: | chr1:88530026-88529793 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 27-409 |
| Cow position: | chr1:76096201-76096593 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 32-386 |
| Cow position: | chr1:85411346-85411714 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 32-398 |
| Cow position: | chr1:22910140-22910501 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 97, 51 |
| Conread position: | 34-412 |
| Cow position: | chr1:27976378-27976757 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 50 |
| Conread position: | 36-398 |
| Cow position: | chr1:18283268-18283629 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 87, 48 |
| Conread position: | 36-424 |
| Cow position: | chr1:32913522-32913912 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 37-412 |
| Cow position: | chr1:92010085-92010476 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 39-420 |
| Cow position: | chr1:88911116-88910729 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 40-398 |
| Cow position: | chr1:69415943-69415563 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 41-369 |
| Cow position: | chr1:15691113-15691450 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 55-409 |
| Cow position: | chr1:26428039-26427701 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 236, 27 |
| Conread position: | 57-398 |
| Cow position: | chr1:58825340-58825687 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 74-369 |
| Cow position: | chr1:101771715-101772018 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 85-398 |
| Cow position: | chr1:89443660-89443332 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 44, 153 |
| Conread position: | 85-422 |
| Cow position: | chr1:69004209-69004562 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 86-424 |
| Cow position: | chr1:20581766-20582121 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 149 |
| Conread position: | 89-386 |
| Cow position: | chr1:8192909-8192599 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 39, 143 |
| Conread position: | 90-381 |
| Cow position: | chr1:50345364-50345677 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 92-385 |
| Cow position: | chr1:61225133-61225416 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 93-424 |
| Cow position: | chr1:5278592-5278239 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 162 |
| Conread position: | 95-398 |
| Cow position: | chr1:54125366-54125077 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 98-373 |
| Cow position: | chr1:2997773-2998070 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 101-349 |
| Cow position: | chr1:57782842-57783103 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 101-381 |
| Cow position: | chr1:40389028-40388739 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 31, 138 |
| Conread position: | 102-341 |
| Cow position: | chr1:39025868-39026128 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 206 |
| Conread position: | 121-424 |
| Cow position: | chr1:96339608-96339914 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 131-363 |
| Cow position: | chr1:58036898-58037131 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 131-381 |
| Cow position: | chr1:29657694-29657948 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 118 |
| Conread position: | 132-404 |
| Cow position: | chr1:26531710-26531427 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 132-424 |
| Cow position: | chr1:18414585-18414290 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 141-412 |
| Cow position: | chr1:50045676-50045962 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 268 |
| Conread position: | 142-381 |
| Cow position: | chr1:51904448-51904209 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 195 |
| Conread position: | 147-412 |
| Cow position: | chr1:80973704-80973442 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 220, 22 |
| Conread position: | 154-420 |
| Cow position: | chr1:59132304-59132045 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 155-424 |
| Cow position: | chr1:76170118-76170374 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 159-381 |
| Cow position: | chr1:4788448-4788665 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 210, 24 |
| Conread position: | 159-406 |
| Cow position: | chr1:50634348-50634104 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 182-369 |
| Cow position: | chr1:73653706-73653524 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 188-408 |
| Cow position: | chr1:73900949-73901163 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 182, 29 |
| Conread position: | 188-409 |
| Cow position: | chr1:46646328-46646543 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 188-424 |
| Cow position: | chr1:79115283-79115526 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 189-380 |
| Cow position: | chr1:39121898-39121706 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 189-386 |
| Cow position: | chr1:5229026-5228829 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 189-386 |
| Cow position: | chr1:48083668-48083864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 189-386 |
| Cow position: | chr1:75347563-75347761 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 189-404 |
| Cow position: | chr1:44746806-44747014 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 189-409 |
| Cow position: | chr1:45479646-45479431 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 189-409 |
| Cow position: | chr1:85141789-85141575 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 189-424 |
| Cow position: | chr1:15902433-15902675 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 189-424 |
| Cow position: | chr1:46205760-46205989 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 178, 30 |
| Conread position: | 189-424 |
| Cow position: | chr1:72731979-72732216 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 190-421 |
| Cow position: | chr1:54216958-54217188 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 191-372 |
| Cow position: | chr1:62714008-62713834 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 191-404 |
| Cow position: | chr1:90413324-90413529 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 207, 15 |
| Conread position: | 192-360 |
| Cow position: | chr1:4451328-4451165 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 194-409 |
| Cow position: | chr1:15314976-15314757 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 196-424 |
| Cow position: | chr1:36614139-36613912 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 171, 24 |
| Conread position: | 211-404 |
| Cow position: | chr1:97603671-97603485 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 187, 19 |
| Conread position: | 217-391 |
| Cow position: | chr1:26424797-26424623 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 222-412 |
| Cow position: | chr1:54289224-54289033 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 222-424 |
| Cow position: | chr1:70236292-70236088 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 117, 12 |
| Conread position: | 230-424 |
| Cow position: | chr1:38205450-38205650 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 230-424 |
| Cow position: | chr1:75998491-75998291 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 234-422 |
| Cow position: | chr1:46006226-46006031 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 57, 162 |
| Conread position: | 235-404 |
| Cow position: | chr1:45925021-45925194 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 235-409 |
| Cow position: | chr1:53920571-53920747 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 132, 156 |
| Conread position: | 241-424 |
| Cow position: | chr1:71782676-71782490 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 245-398 |
| Cow position: | chr1:70416120-70416275 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 250-409 |
| Cow position: | chr1:47117281-47117123 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 124, 85 |
| Conread position: | 251-424 |
| Cow position: | chr1:6130736-6130560 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 254-409 |
| Cow position: | chr1:80384764-80384603 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 255-409 |
| Cow position: | chr1:50261927-50261768 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 261-409 |
| Cow position: | chr1:33921271-33921120 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 261-424 |
| Cow position: | chr1:82076583-82076753 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 135 |
| Conread position: | 286-405 |
| Cow position: | chr1:64624792-64624672 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 105 |
Show alignments to all cow chromosomes.