Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-279
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 30

Conread position: 1-369
Cow position:
Alignm length: 392
Alignm identity: 269
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 131, 27

Conread position: 1-380
Cow position:
Alignm length: 403
Alignm identity: 282
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 143, 81

Conread position: 1-397
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 84

Conread position: 1-403
Cow position:
Alignm length: 423
Alignm identity: 283
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 119, 79

Conread position: 1-410
Cow position:
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 84

Conread position: 1-424
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 45

Conread position: 1-424
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 83

Conread position: 1-424
Cow position:
Alignm length: 450
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 43

Conread position: 1-424
Cow position:
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 2-346
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 80

Conread position: 3-347
Cow position:
Alignm length: 369
Alignm identity: 238
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 79

Conread position: 3-386
Cow position:
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 96

Conread position: 3-409
Cow position:
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 81

Conread position: 3-424
Cow position:
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 73

Conread position: 4-369
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 119, 80

Conread position: 4-377
Cow position:
Alignm length: 393
Alignm identity: 269
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 122, 14

Conread position: 4-409
Cow position:
Alignm length: 420
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 125, 7

Conread position: 4-421
Cow position:
Alignm length: 453
Alignm identity: 309
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 11, 77

Conread position: 4-424
Cow position:
Alignm length: 448
Alignm identity: 297
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 165, 38

Conread position: 5-358
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 124, 23

Conread position: 5-409
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 79

Conread position: 5-414
Cow position:
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 29

Conread position: 5-424
Cow position:
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 12

Conread position: 6-369
Cow position:
Alignm length: 370
Alignm identity: 242
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 40

Conread position: 6-388
Cow position:
Alignm length: 390
Alignm identity: 261
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 136, 78

Conread position: 6-409
Cow position:
Alignm length: 409
Alignm identity: 267
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 44

Conread position: 7-270
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 65

Conread position: 7-289
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 123, 81

Conread position: 7-368
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 7-412
Cow position:
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 8-363
Cow position:
Alignm length: 388
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 78

Conread position: 9-381
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 68

Conread position: 9-405
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 33

Conread position: 9-424
Cow position:
Alignm length: 460
Alignm identity: 320
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 78

Conread position: 9-424
Cow position:
Alignm length: 437
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 10-398
Cow position:
Alignm length: 409
Alignm identity: 285
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 119, 13

Conread position: 11-289
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 31

Conread position: 11-291
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 71

Conread position: 11-360
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 31

Conread position: 11-369
Cow position:
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 11-374
Cow position:
Alignm length: 373
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 46, 75

Conread position: 11-409
Cow position:
Alignm length: 412
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 78

Conread position: 11-420
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 71

Conread position: 11-421
Cow position:
Alignm length: 431
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 13-180
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 66

Conread position: 13-404
Cow position:
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 62

Conread position: 15-175
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 56

Conread position: 15-347
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 117, 69

Conread position: 15-349
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 114, 69

Conread position: 15-398
Cow position:
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 15-404
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 70

Conread position: 16-191
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 161, 66

Conread position: 16-409
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 68

Conread position: 16-424
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 26

Conread position: 19-419
Cow position:
Alignm length: 426
Alignm identity: 279
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 114, 23

Conread position: 19-424
Cow position:
Alignm length: 425
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 52

Conread position: 20-384
Cow position:
Alignm length: 371
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 21

Conread position: 24-385
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 109, 64

Conread position: 24-398
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 61

Conread position: 25-290
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 30

Conread position: 26-258
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 16

Conread position: 27-409
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 57

Conread position: 32-386
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 32-398
Cow position:
Alignm length: 373
Alignm identity: 250
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 97, 51

Conread position: 34-412
Cow position:
Alignm length: 396
Alignm identity: 270
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 50

Conread position: 36-398
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 87, 48

Conread position: 36-424
Cow position:
Alignm length: 404
Alignm identity: 272
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 51

Conread position: 37-412
Cow position:
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 47

Conread position: 39-420
Cow position:
Alignm length: 404
Alignm identity: 284
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 84, 43

Conread position: 40-398
Cow position:
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 43

Conread position: 41-369
Cow position:
Alignm length: 351
Alignm identity: 257
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 89, 43

Conread position: 55-409
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 236, 27

Conread position: 57-398
Cow position:
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 74-369
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 25

Conread position: 85-398
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 44, 153

Conread position: 85-422
Cow position:
Alignm length: 363
Alignm identity: 259
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 44, 168

Conread position: 86-424
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 89-386
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 39, 143

Conread position: 90-381
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 92

Conread position: 92-385
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 104

Conread position: 93-424
Cow position:
Alignm length: 356
Alignm identity: 254
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 162

Conread position: 95-398
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 35

Conread position: 98-373
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 11

Conread position: 101-349
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 137

Conread position: 101-381
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 31, 138

Conread position: 102-341
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 206

Conread position: 121-424
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 133

Conread position: 131-363
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 92

Conread position: 131-381
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 118

Conread position: 132-404
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 7

Conread position: 132-424
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 71

Conread position: 141-412
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 268

Conread position: 142-381
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 195

Conread position: 147-412
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 220, 22

Conread position: 154-420
Cow position:
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 22

Conread position: 155-424
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 23

Conread position: 159-381
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 210, 24

Conread position: 159-406
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 16

Conread position: 182-369
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 188-408
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 182, 29

Conread position: 188-409
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 99

Conread position: 188-424
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 33

Conread position: 189-380
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 34

Conread position: 189-386
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 29

Conread position: 189-386
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 41

Conread position: 189-386
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 98, 32

Conread position: 189-404
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 33

Conread position: 189-409
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 178, 33

Conread position: 189-409
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 134, 31

Conread position: 189-424
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 97, 28

Conread position: 189-424
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 178, 30

Conread position: 189-424
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 33

Conread position: 190-421
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 92, 39

Conread position: 191-372
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 28

Conread position: 191-404
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 207, 15

Conread position: 192-360
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 194-409
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 29

Conread position: 196-424
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 24

Conread position: 211-404
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 187, 19

Conread position: 217-391
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 18

Conread position: 222-412
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 64, 19

Conread position: 222-424
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 12

Conread position: 230-424
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 16

Conread position: 230-424
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 28

Conread position: 234-422
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 162

Conread position: 235-404
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 23

Conread position: 235-409
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 132, 156

Conread position: 241-424
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 16, 23

Conread position: 245-398
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 94

Conread position: 250-409
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 85

Conread position: 251-424
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 120

Conread position: 254-409
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 141

Conread position: 255-409
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 139

Conread position: 261-409
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 131

Conread position: 261-424
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 135

Conread position: 286-405
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 105

Show alignments to all cow chromosomes.