Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-220
Cow position: chr10:42232745-42232946 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 188, 19

Conread position: 1-233
Cow position: chr10:2394757-2394511 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 41

Conread position: 1-289
Cow position: chr10:60358439-60358731 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 1-340
Cow position: chr10:6915292-6914959 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 128, 56

Conread position: 1-369
Cow position: chr10:57458424-57458799 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 132, 83

Conread position: 1-374
Cow position: chr10:65132664-65133038 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 242
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 139, 81

Conread position: 1-380
Cow position: chr10:8077447-8077060 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 42, 88

Conread position: 1-384
Cow position: chr10:27576184-27576560 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 164, 41

Conread position: 1-404
Cow position: chr10:42453843-42454244 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 40

Conread position: 1-409
Cow position: chr10:6012328-6011921 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 1-409
Cow position: chr10:26620846-26620430 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 83

Conread position: 1-414
Cow position: chr10:69544621-69544207 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 128, 30

Conread position: 2-294
Cow position: chr10:41637356-41637658 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 80

Conread position: 3-416
Cow position: chr10:19704794-19704374 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 3-424
Cow position: chr10:16650211-16649783 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 130, 33

Conread position: 4-379
Cow position: chr10:21424976-21424579 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 80

Conread position: 4-412
Cow position: chr10:23949213-23948785 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 4-424
Cow position: chr10:24785813-24786259 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 71

Conread position: 5-345
Cow position: chr10:20478600-20478964 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 23

Conread position: 5-376
Cow position: chr10:38725369-38725755 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 74

Conread position: 5-409
Cow position: chr10:10124053-10124474 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 80

Conread position: 5-421
Cow position: chr10:41985178-41984744 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 82

Conread position: 5-421
Cow position: chr10:56705875-56705443 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 77

Conread position: 6-351
Cow position: chr10:7328440-7328780 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 82

Conread position: 6-424
Cow position: chr10:9342028-9341585 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-290
Cow position: chr10:36231698-36231981 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 60

Conread position: 7-336
Cow position: chr10:38155169-38155511 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 10

Conread position: 7-340
Cow position: chr10:42755044-42755383 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 78

Conread position: 7-409
Cow position: chr10:25478816-25479222 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 122, 61

Conread position: 7-424
Cow position: chr10:62516586-62517033 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 78

Conread position: 8-290
Cow position: chr10:40646256-40646543 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 23

Conread position: 9-191
Cow position: chr10:51779314-51779138 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 8

Conread position: 9-370
Cow position: chr10:65791555-65791904 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 114, 75

Conread position: 9-372
Cow position: chr10:31855046-31855428 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 130, 19

Conread position: 9-419
Cow position: chr10:23097051-23096635 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 135, 33

Conread position: 11-385
Cow position: chr10:30450342-30449957 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 24

Conread position: 11-386
Cow position: chr10:58607824-58608209 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 32

Conread position: 12-290
Cow position: chr10:49679761-49680043 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 87

Conread position: 13-404
Cow position: chr10:65072393-65071993 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 73

Conread position: 13-408
Cow position: chr10:55011857-55012260 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 72

Conread position: 15-409
Cow position: chr10:48255504-48255093 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 67

Conread position: 15-412
Cow position: chr10:11032778-11032367 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 96, 46

Conread position: 15-423
Cow position: chr10:28039212-28038788 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 27

Conread position: 16-398
Cow position: chr10:52589972-52589563 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 64, 7

Conread position: 20-360
Cow position: chr10:25293515-25293867 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 71

Conread position: 22-424
Cow position: chr10:19591038-19590613 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 21

Conread position: 26-424
Cow position: chr10:8413320-8412903 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 103, 50

Conread position: 30-369
Cow position: chr10:60960675-60961024 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 12

Conread position: 32-419
Cow position: chr10:6491036-6490626 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 10

Conread position: 36-290
Cow position: chr10:47493464-47493204 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 37

Conread position: 36-386
Cow position: chr10:15391255-15391596 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Conread position: 46-424
Cow position: chr10:6038584-6038193 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 11

Conread position: 47-422
Cow position: chr10:59153889-59153514 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 115, 19

Conread position: 56-258
Cow position: chr10:30497400-30497604 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 28

Conread position: 59-324
Cow position: chr10:57563647-57563926 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 25

Conread position: 84-409
Cow position: chr10:27538300-27538630 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 135

Conread position: 85-365
Cow position: chr10:9568840-9568537 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 85-379
Cow position: chr10:38429762-38429450 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 158

Conread position: 85-424
Cow position: chr10:38739339-38739675 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 150

Conread position: 89-402
Cow position: chr10:26145620-26145289 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 39

Conread position: 90-349
Cow position: chr10:8219073-8219355 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 247

Conread position: 93-409
Cow position: chr10:29689528-29689202 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 111

Conread position: 94-345
Cow position: chr10:22977876-22977615 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 97

Conread position: 94-404
Cow position: chr10:50044851-50044519 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 143

Conread position: 104-348
Cow position: chr10:23135134-23135379 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 77

Conread position: 112-381
Cow position: chr10:1070326-1070043 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 120

Conread position: 116-424
Cow position: chr10:30741222-30741525 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 174, 9

Conread position: 125-384
Cow position: chr10:64722158-64721901 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 34

Conread position: 174-406
Cow position: chr10:69225820-69226055 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 38

Conread position: 182-424
Cow position: chr10:62325519-62325761 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 187, 40

Conread position: 188-309
Cow position: chr10:613749-613866 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 188-420
Cow position: chr10:15874165-15873933 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 104, 41

Conread position: 189-381
Cow position: chr10:11404225-11404036 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 103, 28

Conread position: 189-406
Cow position: chr10:49624676-49624894 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 28

Conread position: 189-409
Cow position: chr10:66874909-66874690 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 33

Conread position: 190-419
Cow position: chr10:31368821-31368591 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 12

Conread position: 191-424
Cow position: chr10:23404114-23404349 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 31

Conread position: 193-369
Cow position: chr10:66753154-66753328 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 24

Conread position: 193-421
Cow position: chr10:12100633-12100400 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 29

Conread position: 220-424
Cow position: chr10:68251755-68251962 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 154, 13

Conread position: 221-405
Cow position: chr10:9794718-9794535 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 11

Conread position: 227-419
Cow position: chr10:53762171-53761983 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 140, 108

Conread position: 230-385
Cow position: chr10:1478485-1478326 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 6

Conread position: 230-424
Cow position: chr10:52244700-52244496 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 6

Conread position: 236-367
Cow position: chr10:8330569-8330700 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 251-416
Cow position: chr10:6921691-6921852 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 95

Conread position: 286-424
Cow position: chr10:52889229-52889087 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 105

Show alignments to all cow chromosomes.