Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               188, 19
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               139, 81
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               42, 88
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               164, 41
               

               Conread position:
               1-404
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               1-414
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               295
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               127, 80
               

               Conread position:
               3-416
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 12
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               4-379
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 80
               

               Conread position:
               4-412
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               5-376
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               157, 74
               

               Conread position:
               5-409
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               5-421
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 82
               

               Conread position:
               5-421
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 77
               

               Conread position:
               6-351
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               7-336
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               7-340
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               308
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               122, 61
               

               Conread position:
               7-424
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               8-290
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 23
               

               Conread position:
               9-191
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               9-370
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               114, 75
               

               Conread position:
               9-372
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               9-419
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               135, 33
               

               Conread position:
               11-385
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               11-386
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 32
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               75, 87
               

               Conread position:
               13-404
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 73
               

               Conread position:
               13-408
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               15-409
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 67
               

               Conread position:
               15-412
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               296
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               15-423
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               16-398
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               20-360
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               22-424
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               26-424
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               307
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               30-369
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               32-419
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               36-290
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               36-386
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               46-424
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               47-422
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               56-258
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               59-324
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               84-409
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 135
               

               Conread position:
               85-365
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               85-379
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 158
               

               Conread position:
               85-424
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               89-402
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               90-349
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 247
               

               Conread position:
               93-409
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 111
               

               Conread position:
               94-345
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               94-404
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               104-348
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               112-381
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               116-424
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               174, 9
               

               Conread position:
               125-384
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               174-406
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               182-424
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               187, 40
               

               Conread position:
               188-309
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               188-420
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               189-381
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               189-406
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               189-409
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               190-419
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 12
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               193-369
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               193-421
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               220-424
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               154, 13
               

               Conread position:
               221-405
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               227-419
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               140, 108
               

               Conread position:
               230-385
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 6
               

               Conread position:
               230-424
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 6
               

               Conread position:
               236-367
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-416
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 95
               

               Conread position:
               286-424
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 105
               
Show alignments to all cow chromosomes.