Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-309 |
| Cow position: | chr12:5146526-5146829 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 1-327 |
| Cow position: | chr12:20312475-20312140 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 1-381 |
| Cow position: | chr12:25312686-25312286 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 83 |
| Conread position: | 1-386 |
| Cow position: | chr12:30596154-30596561 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 83 |
| Conread position: | 1-390 |
| Cow position: | chr12:10846927-10846554 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 128, 67 |
| Conread position: | 1-423 |
| Cow position: | chr12:24559043-24559494 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 1-424 |
| Cow position: | chr12:1223651-1223212 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 128, 41 |
| Conread position: | 1-424 |
| Cow position: | chr12:1883816-1883402 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 3-322 |
| Cow position: | chr12:15259015-15258690 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 3-369 |
| Cow position: | chr12:33457843-33458222 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 3-384 |
| Cow position: | chr12:31198461-31198858 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 60 |
| Conread position: | 4-289 |
| Cow position: | chr12:44014146-44013850 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 125, 78 |
| Conread position: | 4-354 |
| Cow position: | chr12:47800119-47799764 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 20 |
| Conread position: | 4-369 |
| Cow position: | chr12:3212018-3212392 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 4-395 |
| Cow position: | chr12:25619683-25619278 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 4-419 |
| Cow position: | chr12:18769382-18768944 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 7-398 |
| Cow position: | chr12:23983365-23983767 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 7-424 |
| Cow position: | chr12:16543871-16543442 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 35 |
| Conread position: | 11-393 |
| Cow position: | chr12:25606392-25606806 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 11-424 |
| Cow position: | chr12:34850129-34849723 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 11-424 |
| Cow position: | chr12:34852768-34852360 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 17-379 |
| Cow position: | chr12:5899234-5899596 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 18-350 |
| Cow position: | chr12:14523632-14523987 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 19-372 |
| Cow position: | chr12:23379283-23379649 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 25-398 |
| Cow position: | chr12:43104244-43104609 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 36-329 |
| Cow position: | chr12:48405857-48406140 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 39-367 |
| Cow position: | chr12:28559024-28559367 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 56-381 |
| Cow position: | chr12:30064690-30065022 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 85-398 |
| Cow position: | chr12:41642207-41642535 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 91-424 |
| Cow position: | chr12:32413285-32413643 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 327 |
| Conread position: | 168-424 |
| Cow position: | chr12:4582821-4583078 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 182-404 |
| Cow position: | chr12:14325379-14325162 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 189-400 |
| Cow position: | chr12:24204413-24204206 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 189-409 |
| Cow position: | chr12:31528954-31528739 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 197-408 |
| Cow position: | chr12:29691298-29691081 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 196 |
| Conread position: | 200-380 |
| Cow position: | chr12:40716133-40715959 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 200-409 |
| Cow position: | chr12:44057425-44057630 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 168, 12 |
| Conread position: | 226-416 |
| Cow position: | chr12:17262783-17262972 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 141, 165 |
| Conread position: | 238-424 |
| Cow position: | chr12:13657804-13657617 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 157 |
| Conread position: | 241-412 |
| Cow position: | chr12:3816427-3816604 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 156 |
| Conread position: | 253-424 |
| Cow position: | chr12:5497867-5497693 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 112 |
| Conread position: | 269-398 |
| Cow position: | chr12:11520147-11520276 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 122 |
| Conread position: | 282-424 |
| Cow position: | chr12:16850926-16850779 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 110 |
Show alignments to all cow chromosomes.