Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               125, 45
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               132, 49
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               122, 81
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               1-412
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 83
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 83
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               3-398
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 81
               

               Conread position:
               3-409
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 37
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 82
               

               Conread position:
               4-372
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               169, 39
               

               Conread position:
               4-395
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 42
               

               Conread position:
               4-412
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               293
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               4-421
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               5-387
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 82
               

               Conread position:
               6-404
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               7-349
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               7-407
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               300
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               9-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               9-408
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 237
               

               Conread position:
               11-341
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               118, 71
               

               Conread position:
               11-343
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               260
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               118, 48
               

               Conread position:
               11-372
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 73
               

               Conread position:
               11-377
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 243
               

               Conread position:
               11-398
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               11-424
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 71
               

               Conread position:
               12-293
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 72
               

               Conread position:
               12-410
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               119, 41
               

               Conread position:
               15-235
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               15-386
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 142
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 69
               

               Conread position:
               15-412
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               114, 27
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 69
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 67
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               17-409
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 29
               

               Conread position:
               23-328
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               26-424
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               26-424
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               27-229
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               31-398
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               31-420
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               34-379
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               41-421
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               88, 43
               

               Conread position:
               56-424
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               59-424
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               268
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               85-424
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 171
               

               Conread position:
               102-341
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               121-386
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               124-367
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 109
               

               Conread position:
               131-386
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               132-420
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               61, 215
               

               Conread position:
               150-339
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               150-369
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               153-424
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               154-424
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               158-369
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               159-369
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               159-381
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               177-398
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               191, 45
               

               Conread position:
               188-408
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               181, 30
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 34
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               189-358
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               189-380
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               189-384
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               189-400
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               209, 16
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               209, 30
               

               Conread position:
               190-421
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               191-409
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               180, 35
               

               Conread position:
               200-402
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               201-424
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               166, 16
               

               Conread position:
               203-403
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               88, 19
               

               Conread position:
               207-369
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               223-421
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 173
               

               Conread position:
               228-398
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 164
               

               Conread position:
               234-386
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               236-400
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               138, 155
               

               Conread position:
               244-412
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 147
               
Show alignments to all cow chromosomes.