Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-192
Cow position: chr13:37497502-37497688 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 125, 45

Conread position: 1-272
Cow position: chr13:29819982-29820263 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 81

Conread position: 1-287
Cow position: chr13:4866724-4867010 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 71

Conread position: 1-288
Cow position: chr13:21402539-21402812 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 83

Conread position: 1-367
Cow position: chr13:54080548-54080940 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 55

Conread position: 1-368
Cow position: chr13:4208561-4208941 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 132, 49

Conread position: 1-369
Cow position: chr13:8838738-8839122 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 122, 81

Conread position: 1-369
Cow position: chr13:12521528-12521906 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 128, 45

Conread position: 1-369
Cow position: chr13:60974331-60973952 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 114, 53

Conread position: 1-379
Cow position: chr13:38897997-38898378 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 75

Conread position: 1-398
Cow position: chr13:14717081-14717495 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 1-408
Cow position: chr13:9125929-9125502 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 128, 75

Conread position: 1-412
Cow position: chr13:23265985-23265564 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 83

Conread position: 1-421
Cow position: chr13:25434873-25435305 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 83

Conread position: 1-424
Cow position: chr13:7010725-7010286 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 83

Conread position: 3-398
Cow position: chr13:6621344-6621748 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 81

Conread position: 3-409
Cow position: chr13:32717617-32718033 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 86

Conread position: 3-424
Cow position: chr13:9803311-9802879 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 37

Conread position: 3-424
Cow position: chr13:33160762-33161183 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 82

Conread position: 4-372
Cow position: chr13:51940982-51940604 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 169, 39

Conread position: 4-395
Cow position: chr13:54969570-54969959 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 42

Conread position: 4-412
Cow position: chr13:60650667-60651074 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 293
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 70

Conread position: 4-421
Cow position: chr13:62169287-62169723 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 81

Conread position: 5-387
Cow position: chr13:3015916-3016320 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 82

Conread position: 6-404
Cow position: chr13:12233205-12233617 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 83

Conread position: 7-349
Cow position: chr13:42200868-42200510 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 122, 35

Conread position: 7-407
Cow position: chr13:11834235-11834644 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 121, 35

Conread position: 9-384
Cow position: chr13:49848165-49847782 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 73, 33

Conread position: 9-408
Cow position: chr13:46284369-46284776 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 237

Conread position: 11-341
Cow position: chr13:33631366-33631029 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 71

Conread position: 11-343
Cow position: chr13:29631098-29630755 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 118, 48

Conread position: 11-372
Cow position: chr13:18351086-18350705 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 11-377
Cow position: chr13:9665321-9664924 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 243

Conread position: 11-398
Cow position: chr13:24280494-24280100 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 73

Conread position: 11-424
Cow position: chr13:34995080-34995519 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 71

Conread position: 12-293
Cow position: chr13:10658538-10658256 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 72

Conread position: 12-410
Cow position: chr13:13577792-13578203 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 119, 41

Conread position: 15-235
Cow position: chr13:8607277-8607513 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 49

Conread position: 15-386
Cow position: chr13:20180639-20180270 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 142

Conread position: 15-400
Cow position: chr13:22886750-22887149 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 69

Conread position: 15-412
Cow position: chr13:33282255-33281838 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 114, 27

Conread position: 15-424
Cow position: chr13:1959251-1958818 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 69

Conread position: 15-424
Cow position: chr13:10932794-10932366 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 67

Conread position: 15-424
Cow position: chr13:17886743-17886328 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 68

Conread position: 17-409
Cow position: chr13:20466055-20466455 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 23-328
Cow position: chr13:38691305-38691617 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 61

Conread position: 26-424
Cow position: chr13:11767810-11768234 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 26-424
Cow position: chr13:14220701-14220314 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 59

Conread position: 27-229
Cow position: chr13:50823326-50823543 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 40

Conread position: 31-398
Cow position: chr13:35718908-35719295 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 53

Conread position: 31-420
Cow position: chr13:17347034-17346626 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 8, 54

Conread position: 34-379
Cow position: chr13:35653870-35654228 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 16

Conread position: 41-421
Cow position: chr13:8245116-8245513 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 43

Conread position: 56-424
Cow position: chr13:21627683-21628065 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 28

Conread position: 59-424
Cow position: chr13:34761869-34761495 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 108, 28

Conread position: 85-424
Cow position: chr13:46430126-46430483 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 171

Conread position: 102-341
Cow position: chr13:58484913-58484672 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 117

Conread position: 121-386
Cow position: chr13:33975554-33975287 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 7

Conread position: 124-367
Cow position: chr13:15945610-15945355 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 109

Conread position: 131-386
Cow position: chr13:16952573-16952325 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 44

Conread position: 132-420
Cow position: chr13:12745795-12745487 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 215

Conread position: 150-339
Cow position: chr13:54695828-54696011 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 150-369
Cow position: chr13:33954942-33955153 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 153-424
Cow position: chr13:32773443-32773174 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 45

Conread position: 154-424
Cow position: chr13:43155759-43156045 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 53

Conread position: 158-369
Cow position: chr13:50739245-50739041 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 25

Conread position: 159-369
Cow position: chr13:35564376-35564184 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 159-381
Cow position: chr13:54471090-54470876 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 24

Conread position: 177-398
Cow position: chr13:52748734-52748951 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 191, 45

Conread position: 188-408
Cow position: chr13:18761681-18761897 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 181, 30

Conread position: 188-409
Cow position: chr13:15090857-15091077 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 34

Conread position: 188-424
Cow position: chr13:661591-661826 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 40

Conread position: 188-424
Cow position: chr13:47188494-47188254 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 71

Conread position: 189-358
Cow position: chr13:6894086-6893921 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 40

Conread position: 189-380
Cow position: chr13:21888137-21888329 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 98, 33

Conread position: 189-384
Cow position: chr13:52966923-52966734 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 41

Conread position: 189-400
Cow position: chr13:58348128-58347926 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 209, 16

Conread position: 189-424
Cow position: chr13:30271374-30271134 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 209, 30

Conread position: 190-421
Cow position: chr13:49200685-49200454 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 43

Conread position: 191-409
Cow position: chr13:32167266-32167480 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 180, 35

Conread position: 200-402
Cow position: chr13:53788067-53788270 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 30

Conread position: 201-424
Cow position: chr13:33347165-33346949 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 166, 16

Conread position: 203-403
Cow position: chr13:38631539-38631741 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 19

Conread position: 207-369
Cow position: chr13:17796409-17796240 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 152

Conread position: 223-421
Cow position: chr13:52568980-52569185 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 173

Conread position: 228-398
Cow position: chr13:40464244-40464073 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 164

Conread position: 234-386
Cow position: chr13:14099104-14099258 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 236-400
Cow position: chr13:26508489-26508324 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 138, 155

Conread position: 244-412
Cow position: chr13:18551002-18550832 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 147

Show alignments to all cow chromosomes.