Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               128, 81
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               131, 81
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 40
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               3-409
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               4-404
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 78
               

               Conread position:
               4-406
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 24
               

               Conread position:
               5-369
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               190, 82
               

               Conread position:
               5-369
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 37
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               6-340
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 78
               

               Conread position:
               6-386
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 78
               

               Conread position:
               6-398
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               177, 22
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               7-345
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               7-412
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               7-412
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               9-357
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               10-398
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               11-340
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               28, 72
               

               Conread position:
               11-379
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               11-386
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               6, 44
               

               Conread position:
               11-398
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               11-408
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 73
               

               Conread position:
               11-408
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 77
               

               Conread position:
               12-422
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               14-381
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               14-398
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               115, 68
               

               Conread position:
               15-398
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 69
               

               Conread position:
               16-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 66
               

               Conread position:
               19-409
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               20-404
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               21-409
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               21-424
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               22-345
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               23-386
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               35-422
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               36-369
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               37-271
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               86, 47
               

               Conread position:
               40-424
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 44
               

               Conread position:
               47-380
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               47-412
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               50-385
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               115, 34
               

               Conread position:
               52-424
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               56-424
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               64-278
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               84-424
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 341
               

               Conread position:
               89-396
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 167
               

               Conread position:
               90-370
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 177
               

               Conread position:
               92-373
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 145
               

               Conread position:
               106-380
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 143
               

               Conread position:
               108-384
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 114
               

               Conread position:
               120-422
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               159-345
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               159-361
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               170-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               180-369
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               188-386
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               179, 41
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               136, 42
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               155, 34
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               179, 30
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               165, 28
               

               Conread position:
               189-358
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               189-421
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               158, 32
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               176, 29
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               193-377
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               196-424
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               171, 41
               

               Conread position:
               208-398
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               212-373
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               218-404
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               180, 172
               

               Conread position:
               226-395
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               288-424
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 102
               
Show alignments to all cow chromosomes.