Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-304 |
| Cow position: | chr15:10615381-10615688 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 132, 83 |
| Conread position: | 1-369 |
| Cow position: | chr15:19186255-19186637 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 128, 81 |
| Conread position: | 1-369 |
| Cow position: | chr15:33976333-33976719 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 1-370 |
| Cow position: | chr15:1830926-1830540 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 1-396 |
| Cow position: | chr15:26421239-26421649 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 3-368 |
| Cow position: | chr15:23139804-23140147 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 3-409 |
| Cow position: | chr15:24976833-24977239 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 84 |
| Conread position: | 4-404 |
| Cow position: | chr15:20482480-20482907 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 78 |
| Conread position: | 4-406 |
| Cow position: | chr15:19279741-19280154 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 5-369 |
| Cow position: | chr15:26734966-26734613 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 190, 82 |
| Conread position: | 5-369 |
| Cow position: | chr15:39363661-39364023 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 5-424 |
| Cow position: | chr15:8230222-8230648 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 5-424 |
| Cow position: | chr15:34255392-34255804 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 5-424 |
| Cow position: | chr15:44252718-44252280 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 6-340 |
| Cow position: | chr15:27732753-27732417 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 6-386 |
| Cow position: | chr15:38323185-38322793 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 78 |
| Conread position: | 6-398 |
| Cow position: | chr15:50177450-50177056 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 177, 22 |
| Conread position: | 6-424 |
| Cow position: | chr15:9177857-9178281 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 7-345 |
| Cow position: | chr15:52204413-52204756 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 7-412 |
| Cow position: | chr15:27862974-27863395 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 7-412 |
| Cow position: | chr15:31616650-31617075 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 9-357 |
| Cow position: | chr15:4373827-4373474 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 80 |
| Conread position: | 10-398 |
| Cow position: | chr15:12170589-12170191 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 11-340 |
| Cow position: | chr15:4970447-4970761 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 11-379 |
| Cow position: | chr15:4535257-4534875 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 128, 71 |
| Conread position: | 11-386 |
| Cow position: | chr15:11957884-11957498 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 11-398 |
| Cow position: | chr15:19725390-19725762 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 11-408 |
| Cow position: | chr15:7962427-7962017 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 73 |
| Conread position: | 11-408 |
| Cow position: | chr15:19813000-19812597 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 77 |
| Conread position: | 12-422 |
| Cow position: | chr15:17213803-17213379 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 14-381 |
| Cow position: | chr15:33625300-33624921 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 14-398 |
| Cow position: | chr15:6491242-6491645 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 15-398 |
| Cow position: | chr15:15215366-15214964 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 16-400 |
| Cow position: | chr15:3572359-3572755 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 66 |
| Conread position: | 19-409 |
| Cow position: | chr15:39894920-39894532 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 49 |
| Conread position: | 20-404 |
| Cow position: | chr15:48486974-48486577 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 21-409 |
| Cow position: | chr15:31545009-31545414 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 21-424 |
| Cow position: | chr15:52982156-52981755 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 22-345 |
| Cow position: | chr15:6627953-6628282 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 21 |
| Conread position: | 23-386 |
| Cow position: | chr15:40497976-40498335 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 35-422 |
| Cow position: | chr15:3572101-3571700 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 36-369 |
| Cow position: | chr15:16604147-16603801 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 37-271 |
| Cow position: | chr15:20401590-20401828 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 40-424 |
| Cow position: | chr15:31907971-31907567 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 47-380 |
| Cow position: | chr15:31182733-31182398 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 47-412 |
| Cow position: | chr15:22886863-22886489 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 50-385 |
| Cow position: | chr15:42194968-42195306 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 52-424 |
| Cow position: | chr15:24411715-24411335 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 56-424 |
| Cow position: | chr15:31599638-31599252 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 64-278 |
| Cow position: | chr15:51583520-51583297 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 84-424 |
| Cow position: | chr15:25689260-25688880 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 341 |
| Conread position: | 89-396 |
| Cow position: | chr15:22854683-22854358 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 90-370 |
| Cow position: | chr15:23957977-23957688 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 92-373 |
| Cow position: | chr15:12673916-12673618 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 145 |
| Conread position: | 106-380 |
| Cow position: | chr15:36838918-36839209 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 108-384 |
| Cow position: | chr15:40117201-40117488 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 120-422 |
| Cow position: | chr15:26933721-26934033 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 159-345 |
| Cow position: | chr15:29900349-29900530 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 159-361 |
| Cow position: | chr15:43130498-43130296 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 170-398 |
| Cow position: | chr15:23109103-23109336 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 180-369 |
| Cow position: | chr15:37964695-37964510 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 188-386 |
| Cow position: | chr15:24864114-24864307 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 179, 41 |
| Conread position: | 188-409 |
| Cow position: | chr15:21836836-21836623 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 136, 42 |
| Conread position: | 188-409 |
| Cow position: | chr15:44879757-44879540 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 188-409 |
| Cow position: | chr15:47821530-47821313 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 179, 30 |
| Conread position: | 188-424 |
| Cow position: | chr15:12036966-12036730 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 165, 28 |
| Conread position: | 189-358 |
| Cow position: | chr15:16585662-16585499 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 189-421 |
| Cow position: | chr15:14758099-14758327 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 158, 32 |
| Conread position: | 189-424 |
| Cow position: | chr15:27247655-27247420 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 176, 29 |
| Conread position: | 189-424 |
| Cow position: | chr15:35967336-35967569 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 97, 33 |
| Conread position: | 191-424 |
| Cow position: | chr15:6749696-6749931 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 176, 32 |
| Conread position: | 193-377 |
| Cow position: | chr15:27749033-27749209 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 196-424 |
| Cow position: | chr15:8022198-8021970 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 171, 41 |
| Conread position: | 208-398 |
| Cow position: | chr15:35283331-35283520 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 212-373 |
| Cow position: | chr15:46005516-46005676 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 218-404 |
| Cow position: | chr15:17788237-17788051 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 180, 172 |
| Conread position: | 226-395 |
| Cow position: | chr15:39200902-39200734 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 288-424 |
| Cow position: | chr15:2117941-2117799 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 110, 102 |
Show alignments to all cow chromosomes.