Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               129, 68
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               128, 42
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               125, 64
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 81
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               122, 19
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 81
               

               Conread position:
               3-404
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               126, 43
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               4-343
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               4-348
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               129, 27
               

               Conread position:
               4-354
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               125, 61
               

               Conread position:
               4-386
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               4-409
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               191, 61
               

               Conread position:
               4-422
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               6-369
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               130, 30
               

               Conread position:
               6-400
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 62
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               311
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               7-175
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               7-372
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               157, 75
               

               Conread position:
               7-374
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               8-343
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               165, 34
               

               Conread position:
               8-409
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               10-377
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               11-290
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               11-361
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               11-372
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               166, 71
               

               Conread position:
               11-380
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               11-386
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               122, 70
               

               Conread position:
               11-422
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               300
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               120, 18
               

               Conread position:
               11-424
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               13-404
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               13-409
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               13-409
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 29
               

               Conread position:
               15-379
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               15-398
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 133
               

               Conread position:
               19-294
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 61
               

               Conread position:
               21-404
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               22-424
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               23-369
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               24-422
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 152
               

               Conread position:
               24-424
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               91, 70
               

               Conread position:
               26-386
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               33-381
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               36-356
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               36-364
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               37-386
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               38-421
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 45
               

               Conread position:
               39-342
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               40-309
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               50-423
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               65-424
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               85-398
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               93-322
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 88
               

               Conread position:
               94-386
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               103-384
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 211
               

               Conread position:
               106-409
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               136-424
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               141-406
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               151-424
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               159-386
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               161-424
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               206, 62
               

               Conread position:
               162-407
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               133, 25
               

               Conread position:
               188-404
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               179, 34
               

               Conread position:
               188-408
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               179, 34
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               108, 34
               

               Conread position:
               189-370
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               189-405
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               189-421
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               131, 37
               

               Conread position:
               190-404
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               193-398
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               196-343
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               196-416
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               174, 34
               

               Conread position:
               200-382
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 26
               

               Conread position:
               216-419
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 178
               

               Conread position:
               234-404
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               235-409
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               253-409
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               122, 90
               

               Conread position:
               262-424
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 24
               
Show alignments to all cow chromosomes.