Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 284
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               275, 81
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 41
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 67
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               3-366
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               3-386
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               4-397
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               4-400
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               4-409
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 78
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               5-341
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               6-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               6-371
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               123, 25
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               282, 36
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               300
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               126, 5
               

               Conread position:
               9-398
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               120, 74
               

               Conread position:
               9-406
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               288
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               180, 75
               

               Conread position:
               9-424
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               11-398
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               11-423
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 76
               

               Conread position:
               11-424
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               212, 78
               

               Conread position:
               12-358
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               13-354
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               13-424
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               297
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               164, 69
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               19-398
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               19-424
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               20-370
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               21-386
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               22-299
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               107, 62
               

               Conread position:
               26-412
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               28-323
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               36-424
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 199
               

               Conread position:
               45-409
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               47-369
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               47-408
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               84-409
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               85-424
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               106-424
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               58, 120
               

               Conread position:
               142-370
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               142-404
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               149, 35
               

               Conread position:
               147-377
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               174, 11
               

               Conread position:
               153-369
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               156-381
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               206, 25
               

               Conread position:
               184-407
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               188-341
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               188-363
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               189-381
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               130, 30
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               179, 33
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               191-400
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               194-409
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               222-403
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               235-398
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 160
               

               Conread position:
               238-404
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               130, 43
               

               Conread position:
               242-424
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               289-424
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               78, 102
               
Show alignments to all cow chromosomes.