Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               122, 81
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 79
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 86
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               128, 65
               

               Conread position:
               2-369
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               98, 37
               

               Conread position:
               3-398
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               3-414
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               4-378
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               4-386
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               129, 24
               

               Conread position:
               4-409
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               98, 83
               

               Conread position:
               4-418
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               312
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               5-400
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 5
               

               Conread position:
               7-343
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               127, 75
               

               Conread position:
               7-369
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 72
               

               Conread position:
               7-379
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               156, 35
               

               Conread position:
               8-424
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               102, 76
               

               Conread position:
               11-354
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               118, 44
               

               Conread position:
               11-377
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               11-404
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               11-424
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 71
               

               Conread position:
               13-398
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               15-234
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 72
               

               Conread position:
               15-344
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               17-424
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               18-219
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 67
               

               Conread position:
               21-421
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               24-369
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               25-379
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               31-412
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               34-422
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               35-404
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               41-291
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               55-416
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               56-327
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 182
               

               Conread position:
               65-409
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               83-381
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 159
               

               Conread position:
               85-412
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               85-424
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               19, 159
               

               Conread position:
               94-370
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 145
               

               Conread position:
               95-386
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               101-369
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               104-379
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 94
               

               Conread position:
               142-404
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               147-424
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               251, 30
               

               Conread position:
               154-349
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 65
               

               Conread position:
               170-411
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 180
               

               Conread position:
               171-360
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               182-368
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               182-381
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               180, 35
               

               Conread position:
               182-409
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               188-411
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               189-398
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               189-403
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               189-409
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 33
               

               Conread position:
               202-412
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               222-381
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               227-396
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               135, 14
               

               Conread position:
               234-379
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               251-424
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               116, 94
               

               Conread position:
               260-424
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               268-409
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               268-409
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               138, 24
               
Show alignments to all cow chromosomes.