Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-347 |
| Cow position: | chr19:42465770-42465426 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 122, 81 |
| Conread position: | 1-380 |
| Cow position: | chr19:53738053-53738447 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 79 |
| Conread position: | 1-381 |
| Cow position: | chr19:27346930-27346546 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 1-400 |
| Cow position: | chr19:55236211-55236619 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 86 |
| Conread position: | 1-409 |
| Cow position: | chr19:24721431-24721819 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 128, 65 |
| Conread position: | 2-369 |
| Cow position: | chr19:19673138-19673505 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 3-291 |
| Cow position: | chr19:39697793-39698083 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 3-345 |
| Cow position: | chr19:40714880-40715218 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 3-398 |
| Cow position: | chr19:36461806-36461397 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 42 |
| Conread position: | 3-414 |
| Cow position: | chr19:24689002-24689430 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 4-378 |
| Cow position: | chr19:7473422-7473807 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-386 |
| Cow position: | chr19:36977191-36976792 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 4-409 |
| Cow position: | chr19:21285364-21284937 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 98, 83 |
| Conread position: | 4-418 |
| Cow position: | chr19:3124325-3123905 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 4-424 |
| Cow position: | chr19:19246513-19246933 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 312 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 5-345 |
| Cow position: | chr19:43733484-43733811 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 5-400 |
| Cow position: | chr19:35064462-35064058 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 5-424 |
| Cow position: | chr19:2771285-2770854 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 5-424 |
| Cow position: | chr19:48478691-48479138 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 7-290 |
| Cow position: | chr19:2260400-2260111 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 5 |
| Conread position: | 7-343 |
| Cow position: | chr19:36059656-36060014 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 75 |
| Conread position: | 7-369 |
| Cow position: | chr19:19661766-19662146 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 72 |
| Conread position: | 7-379 |
| Cow position: | chr19:31826834-31827202 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 8-424 |
| Cow position: | chr19:9387359-9387798 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 102, 76 |
| Conread position: | 11-354 |
| Cow position: | chr19:19924868-19924518 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 118, 44 |
| Conread position: | 11-377 |
| Cow position: | chr19:13316673-13316311 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 11-404 |
| Cow position: | chr19:33882429-33882051 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 11-424 |
| Cow position: | chr19:5648923-5648508 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 71 |
| Conread position: | 13-398 |
| Cow position: | chr19:32214535-32214927 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 15-234 |
| Cow position: | chr19:11615965-11615744 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 15-344 |
| Cow position: | chr19:990677-990337 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 17-424 |
| Cow position: | chr19:2342210-2342640 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 18-219 |
| Cow position: | chr19:43516971-43517187 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 111, 67 |
| Conread position: | 21-421 |
| Cow position: | chr19:904721-905121 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 24-369 |
| Cow position: | chr19:22863921-22863567 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 25-379 |
| Cow position: | chr19:54225556-54225197 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 62 |
| Conread position: | 31-412 |
| Cow position: | chr19:31381248-31380860 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 34-422 |
| Cow position: | chr19:32989639-32989269 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 35-404 |
| Cow position: | chr19:20292335-20291955 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 94, 47 |
| Conread position: | 41-291 |
| Cow position: | chr19:44366785-44367042 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 35 |
| Conread position: | 55-416 |
| Cow position: | chr19:35344708-35345079 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 56-327 |
| Cow position: | chr19:47479852-47479567 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 182 |
| Conread position: | 65-409 |
| Cow position: | chr19:43726927-43727276 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 83-381 |
| Cow position: | chr19:7029712-7030034 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 85-412 |
| Cow position: | chr19:31613910-31614255 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 85-424 |
| Cow position: | chr19:15936636-15936994 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 159 |
| Conread position: | 94-370 |
| Cow position: | chr19:22168322-22168611 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 145 |
| Conread position: | 95-386 |
| Cow position: | chr19:7839235-7838928 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 101-369 |
| Cow position: | chr19:33260852-33261123 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 104-379 |
| Cow position: | chr19:9099977-9100260 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 142-404 |
| Cow position: | chr19:4825113-4824844 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 147-424 |
| Cow position: | chr19:39250154-39250420 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 251, 30 |
| Conread position: | 154-349 |
| Cow position: | chr19:53580856-53581047 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 170-411 |
| Cow position: | chr19:30935883-30935634 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 180 |
| Conread position: | 171-360 |
| Cow position: | chr19:10207515-10207702 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 182-368 |
| Cow position: | chr19:25711400-25711224 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 182-381 |
| Cow position: | chr19:952610-952803 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 180, 35 |
| Conread position: | 182-409 |
| Cow position: | chr19:31984734-31984505 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 110, 41 |
| Conread position: | 188-411 |
| Cow position: | chr19:6735306-6735082 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 188-424 |
| Cow position: | chr19:12040546-12040782 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 189-398 |
| Cow position: | chr19:28842446-28842229 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 189-403 |
| Cow position: | chr19:11876780-11876564 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 189-409 |
| Cow position: | chr19:25271491-25271275 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 202-412 |
| Cow position: | chr19:38871003-38871215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 222-381 |
| Cow position: | chr19:3080413-3080577 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 227-396 |
| Cow position: | chr19:36318266-36318434 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 135, 14 |
| Conread position: | 234-379 |
| Cow position: | chr19:21091061-21091207 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 251-424 |
| Cow position: | chr19:2280660-2280483 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 116, 94 |
| Conread position: | 260-424 |
| Cow position: | chr19:46497926-46498092 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 268-409 |
| Cow position: | chr19:5986231-5986379 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 128 |
| Conread position: | 268-409 |
| Cow position: | chr19:39223106-39222967 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 138, 24 |
Show alignments to all cow chromosomes.