Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-284
Cow position: chr20:18185351-18185633 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 159, 81

Conread position: 1-333
Cow position: chr20:21019337-21019686 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 81

Conread position: 1-340
Cow position: chr20:38123657-38124014 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 47

Conread position: 1-369
Cow position: chr20:12996237-12995850 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 82

Conread position: 1-375
Cow position: chr20:26076857-26077244 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 41

Conread position: 1-405
Cow position: chr20:32667762-32668163 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 41

Conread position: 2-372
Cow position: chr20:9267348-9266947 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 20

Conread position: 3-369
Cow position: chr20:18392467-18392115 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 67

Conread position: 3-379
Cow position: chr20:7110344-7109955 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 41

Conread position: 3-409
Cow position: chr20:14679392-14679814 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 60

Conread position: 3-424
Cow position: chr20:23164096-23163688 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 79

Conread position: 4-233
Cow position: chr20:21324901-21325138 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 79

Conread position: 4-290
Cow position: chr20:32153286-32153583 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 29

Conread position: 4-347
Cow position: chr20:32578145-32577788 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 80

Conread position: 4-406
Cow position: chr20:220393-220802 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 42

Conread position: 4-409
Cow position: chr20:15074057-15073634 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 119, 80

Conread position: 4-409
Cow position: chr20:25823059-25823474 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 4-424
Cow position: chr20:17669957-17670396 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 79

Conread position: 4-424
Cow position: chr20:25686577-25686130 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 40

Conread position: 5-345
Cow position: chr20:7803372-7803031 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 38

Conread position: 6-348
Cow position: chr20:5576545-5576910 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 123, 36

Conread position: 6-422
Cow position: chr20:20359994-20359568 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 133, 25

Conread position: 6-424
Cow position: chr20:14512826-14513245 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 7-349
Cow position: chr20:20471568-20471919 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 70

Conread position: 7-419
Cow position: chr20:10759687-10759264 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 77

Conread position: 9-347
Cow position: chr20:3426937-3427264 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 74

Conread position: 9-409
Cow position: chr20:18530228-18530632 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 75

Conread position: 11-272
Cow position: chr20:14831831-14831558 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 74

Conread position: 11-290
Cow position: chr20:11975325-11975054 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 76

Conread position: 11-377
Cow position: chr20:10838437-10838047 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 30

Conread position: 11-424
Cow position: chr20:13465300-13465723 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 305
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 65

Conread position: 12-406
Cow position: chr20:19265940-19266340 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 72

Conread position: 17-420
Cow position: chr20:32862204-32861793 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 116, 54

Conread position: 19-404
Cow position: chr20:27001184-27001577 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 26-278
Cow position: chr20:10687574-10687833 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 214

Conread position: 32-309
Cow position: chr20:2802276-2801999 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 25

Conread position: 49-406
Cow position: chr20:25274459-25274099 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 51

Conread position: 88-424
Cow position: chr20:24234016-24234361 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 151

Conread position: 90-424
Cow position: chr20:8261765-8262131 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 44, 163

Conread position: 93-369
Cow position: chr20:19340006-19339725 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 69, 32

Conread position: 95-369
Cow position: chr20:34178614-34178322 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 275

Conread position: 119-295
Cow position: chr20:26315694-26315518 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 17

Conread position: 127-385
Cow position: chr20:37028734-37028995 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 24

Conread position: 156-386
Cow position: chr20:5763352-5763120 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 11

Conread position: 188-409
Cow position: chr20:17397281-17397067 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 202, 34

Conread position: 188-412
Cow position: chr20:39656227-39656443 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 179, 34

Conread position: 188-424
Cow position: chr20:23235013-23235248 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 183, 35

Conread position: 188-424
Cow position: chr20:30855776-30855553 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 194, 31

Conread position: 189-385
Cow position: chr20:24834072-24834262 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 19

Conread position: 189-396
Cow position: chr20:19865232-19865430 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 180, 33

Conread position: 189-424
Cow position: chr20:7100755-7101003 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 24

Conread position: 189-424
Cow position: chr20:26750228-26749997 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 199, 53

Conread position: 190-424
Cow position: chr20:1205953-1205725 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 133, 30

Conread position: 191-424
Cow position: chr20:14363157-14362936 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 183, 27

Conread position: 208-419
Cow position: chr20:24849795-24850014 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 189

Conread position: 217-424
Cow position: chr20:13609064-13608853 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 25

Conread position: 226-404
Cow position: chr20:4934060-4933879 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 32

Conread position: 229-424
Cow position: chr20:4157434-4157633 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 16

Conread position: 230-383
Cow position: chr20:2456045-2456199 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 236-404
Cow position: chr20:35924762-35924594 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 131, 109

Conread position: 265-407
Cow position: chr20:35683354-35683211 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 126

Show alignments to all cow chromosomes.