Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 74
               

               Conread position:
               1-309
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               131, 79
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               53, 82
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               130, 81
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 81
               

               Conread position:
               2-423
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               175, 40
               

               Conread position:
               3-347
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               3-369
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               170, 17
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               4-369
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               4-386
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 79
               

               Conread position:
               4-396
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               4-412
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               4-422
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               5-240
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               159, 41
               

               Conread position:
               5-408
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               6-421
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               311
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               43, 77
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 76
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               157, 25
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               120, 75
               

               Conread position:
               9-347
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               9-370
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 73
               

               Conread position:
               9-386
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               11-162
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               11-185
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               11-343
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               118, 71
               

               Conread position:
               11-398
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               355, 31
               

               Conread position:
               11-424
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               112, 30
               

               Conread position:
               13-413
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               116, 71
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 62
               

               Conread position:
               15-341
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               16-424
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               287
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               113, 57
               

               Conread position:
               17-424
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 65
               

               Conread position:
               19-369
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               154, 31
               

               Conread position:
               19-404
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               23-409
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               27-409
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               28-349
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               31-280
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               40-424
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 377
               

               Conread position:
               81-371
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               85-378
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               87-424
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               128-398
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               148-411
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               148-424
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               220, 35
               

               Conread position:
               153-424
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               169-360
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               188-412
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               183, 35
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               189-373
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               189-409
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               192-385
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               236-424
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               132, 155
               

               Conread position:
               260-424
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 131
               

               Conread position:
               270-424
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 123
               
Show alignments to all cow chromosomes.