Cow genome map
Conread name: | Pla1-C0000935_B03 |
Conread position: | 1-284 |
Cow position: | chr21:363448-363720 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 190 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 109, 74 |
Conread position: | 1-309 |
Cow position: | chr21:28998114-28997786 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 250 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 10, 84 |
Conread position: | 1-341 |
Cow position: | chr21:34391177-34390826 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 232 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 131, 49 |
Conread position: | 1-342 |
Cow position: | chr21:35897828-35897476 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 251 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 141, 16 |
Conread position: | 1-343 |
Cow position: | chr21:41878269-41878620 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 230 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 131, 79 |
Conread position: | 1-369 |
Cow position: | chr21:38900566-38900949 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 269 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 53, 82 |
Conread position: | 1-369 |
Cow position: | chr21:42384298-42384685 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 264 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 130, 81 |
Conread position: | 1-422 |
Cow position: | chr21:9940390-9939953 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 299 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 35, 19 |
Conread position: | 1-424 |
Cow position: | chr21:31662253-31662704 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 81 |
Conread position: | 2-423 |
Cow position: | chr21:23801327-23800896 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 297 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 175, 40 |
Conread position: | 3-347 |
Cow position: | chr21:23500026-23499673 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 251 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 129, 41 |
Conread position: | 3-369 |
Cow position: | chr21:26244729-26245091 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 240 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 170, 17 |
Conread position: | 4-276 |
Cow position: | chr21:32665976-32665696 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 208 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 80, 52 |
Conread position: | 4-369 |
Cow position: | chr21:29484780-29485155 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 256 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 128, 38 |
Conread position: | 4-386 |
Cow position: | chr21:24698285-24698675 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 79 |
Conread position: | 4-396 |
Cow position: | chr21:15742295-15741881 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 290 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 107, 78 |
Conread position: | 4-412 |
Cow position: | chr21:18378641-18379059 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 281 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 119, 39 |
Conread position: | 4-422 |
Cow position: | chr21:23785828-23786261 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 306 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 124, 20 |
Conread position: | 4-424 |
Cow position: | chr21:33947448-33947017 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 42 |
Conread position: | 5-240 |
Cow position: | chr21:29248047-29247812 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 180 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 159, 41 |
Conread position: | 5-408 |
Cow position: | chr21:35996970-35997389 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 12 |
Conread position: | 6-421 |
Cow position: | chr21:44754982-44754559 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 311 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 43, 77 |
Conread position: | 6-424 |
Cow position: | chr21:4098673-4099104 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 76 |
Conread position: | 6-424 |
Cow position: | chr21:25800212-25800633 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 298 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 157, 25 |
Conread position: | 6-424 |
Cow position: | chr21:31576310-31576726 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 78 |
Conread position: | 7-321 |
Cow position: | chr21:28512331-28512642 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 211 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 120, 75 |
Conread position: | 9-347 |
Cow position: | chr21:6619175-6618840 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 238 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 101, 27 |
Conread position: | 9-370 |
Cow position: | chr21:8420455-8420800 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 73 |
Conread position: | 9-386 |
Cow position: | chr21:4276793-4276409 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 77 |
Conread position: | 11-162 |
Cow position: | chr21:21000223-21000075 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 89, 70 |
Conread position: | 11-185 |
Cow position: | chr21:13256607-13256783 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 139 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 36, 74 |
Conread position: | 11-343 |
Cow position: | chr21:45330805-45330456 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 237 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 118, 71 |
Conread position: | 11-398 |
Cow position: | chr21:24674557-24674921 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 252 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 355, 31 |
Conread position: | 11-424 |
Cow position: | chr21:34739652-34740072 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 297 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 112, 30 |
Conread position: | 13-413 |
Cow position: | chr21:9353245-9353665 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 301 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 116, 71 |
Conread position: | 14-411 |
Cow position: | chr21:34565407-34564996 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 62 |
Conread position: | 15-341 |
Cow position: | chr21:3763930-3763594 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 223 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 94, 16 |
Conread position: | 16-424 |
Cow position: | chr21:18942021-18941601 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 287 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 113, 57 |
Conread position: | 17-424 |
Cow position: | chr21:25286318-25286741 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 65 |
Conread position: | 19-369 |
Cow position: | chr21:47764301-47763942 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 243 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 154, 31 |
Conread position: | 19-404 |
Cow position: | chr21:22353419-22353025 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 272 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 110, 43 |
Conread position: | 23-409 |
Cow position: | chr21:4723294-4723699 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 61 |
Conread position: | 27-409 |
Cow position: | chr21:12087413-12087814 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 294 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 98, 21 |
Conread position: | 28-349 |
Cow position: | chr21:37845928-37845606 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 56 |
Conread position: | 31-280 |
Cow position: | chr21:49662294-49662038 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 187 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 96, 50 |
Conread position: | 40-424 |
Cow position: | chr21:6316032-6316448 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 281 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 44, 377 |
Conread position: | 81-371 |
Cow position: | chr21:45923778-45923477 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 204 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 48, 177 |
Conread position: | 85-378 |
Cow position: | chr21:6058766-6058461 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 215 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 48, 106 |
Conread position: | 87-424 |
Cow position: | chr21:11676167-11675815 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 249 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 128-398 |
Cow position: | chr21:13358262-13358534 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 190 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 145, 23 |
Conread position: | 148-411 |
Cow position: | chr21:26753440-26753711 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 191 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 8, 21 |
Conread position: | 148-424 |
Cow position: | chr21:15239242-15239515 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 198 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 220, 35 |
Conread position: | 153-424 |
Cow position: | chr21:31661964-31662237 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 202 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 13, 68 |
Conread position: | 169-360 |
Cow position: | chr21:49649606-49649796 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 9, 57 |
Conread position: | 188-412 |
Cow position: | chr21:37718446-37718230 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 183, 35 |
Conread position: | 188-424 |
Cow position: | chr21:21181175-21181415 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 175 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 104, 33 |
Conread position: | 189-373 |
Cow position: | chr21:23397849-23397667 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 139 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 103, 33 |
Conread position: | 189-409 |
Cow position: | chr21:47715543-47715327 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 92, 22 |
Conread position: | 189-424 |
Cow position: | chr21:39509390-39509151 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 184 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 105, 35 |
Conread position: | 192-385 |
Cow position: | chr21:36371488-36371676 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 147 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 236-424 |
Cow position: | chr21:13418191-13418001 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 146 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 132, 155 |
Conread position: | 260-424 |
Cow position: | chr21:17807070-17806901 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 107, 131 |
Conread position: | 270-424 |
Cow position: | chr21:26147151-26147316 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 18, 123 |
Show alignments to all cow chromosomes.