Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-284
Cow position: chr21:363448-363720 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 74

Conread position: 1-309
Cow position: chr21:28998114-28997786 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 84

Conread position: 1-341
Cow position: chr21:34391177-34390826 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 131, 49

Conread position: 1-342
Cow position: chr21:35897828-35897476 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 141, 16

Conread position: 1-343
Cow position: chr21:41878269-41878620 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 79

Conread position: 1-369
Cow position: chr21:38900566-38900949 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 53, 82

Conread position: 1-369
Cow position: chr21:42384298-42384685 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 130, 81

Conread position: 1-422
Cow position: chr21:9940390-9939953 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 19

Conread position: 1-424
Cow position: chr21:31662253-31662704 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 81

Conread position: 2-423
Cow position: chr21:23801327-23800896 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 175, 40

Conread position: 3-347
Cow position: chr21:23500026-23499673 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 41

Conread position: 3-369
Cow position: chr21:26244729-26245091 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 170, 17

Conread position: 4-276
Cow position: chr21:32665976-32665696 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 52

Conread position: 4-369
Cow position: chr21:29484780-29485155 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 38

Conread position: 4-386
Cow position: chr21:24698285-24698675 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 79

Conread position: 4-396
Cow position: chr21:15742295-15741881 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 78

Conread position: 4-412
Cow position: chr21:18378641-18379059 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 281
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 119, 39

Conread position: 4-422
Cow position: chr21:23785828-23786261 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 20

Conread position: 4-424
Cow position: chr21:33947448-33947017 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 42

Conread position: 5-240
Cow position: chr21:29248047-29247812 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 159, 41

Conread position: 5-408
Cow position: chr21:35996970-35997389 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 6-421
Cow position: chr21:44754982-44754559 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 43, 77

Conread position: 6-424
Cow position: chr21:4098673-4099104 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 76

Conread position: 6-424
Cow position: chr21:25800212-25800633 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 298
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 157, 25

Conread position: 6-424
Cow position: chr21:31576310-31576726 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 7-321
Cow position: chr21:28512331-28512642 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 75

Conread position: 9-347
Cow position: chr21:6619175-6618840 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 27

Conread position: 9-370
Cow position: chr21:8420455-8420800 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 73

Conread position: 9-386
Cow position: chr21:4276793-4276409 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 11-162
Cow position: chr21:21000223-21000075 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 70

Conread position: 11-185
Cow position: chr21:13256607-13256783 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 36, 74

Conread position: 11-343
Cow position: chr21:45330805-45330456 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 118, 71

Conread position: 11-398
Cow position: chr21:24674557-24674921 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 355, 31

Conread position: 11-424
Cow position: chr21:34739652-34740072 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 297
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 112, 30

Conread position: 13-413
Cow position: chr21:9353245-9353665 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 116, 71

Conread position: 14-411
Cow position: chr21:34565407-34564996 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 62

Conread position: 15-341
Cow position: chr21:3763930-3763594 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 16

Conread position: 16-424
Cow position: chr21:18942021-18941601 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 113, 57

Conread position: 17-424
Cow position: chr21:25286318-25286741 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 65

Conread position: 19-369
Cow position: chr21:47764301-47763942 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 31

Conread position: 19-404
Cow position: chr21:22353419-22353025 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 272
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 43

Conread position: 23-409
Cow position: chr21:4723294-4723699 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 61

Conread position: 27-409
Cow position: chr21:12087413-12087814 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 98, 21

Conread position: 28-349
Cow position: chr21:37845928-37845606 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 56

Conread position: 31-280
Cow position: chr21:49662294-49662038 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 50

Conread position: 40-424
Cow position: chr21:6316032-6316448 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 377

Conread position: 81-371
Cow position: chr21:45923778-45923477 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 177

Conread position: 85-378
Cow position: chr21:6058766-6058461 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 106

Conread position: 87-424
Cow position: chr21:11676167-11675815 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 42, 20

Conread position: 128-398
Cow position: chr21:13358262-13358534 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 145, 23

Conread position: 148-411
Cow position: chr21:26753440-26753711 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 21

Conread position: 148-424
Cow position: chr21:15239242-15239515 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 220, 35

Conread position: 153-424
Cow position: chr21:31661964-31662237 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 13, 68

Conread position: 169-360
Cow position: chr21:49649606-49649796 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 57

Conread position: 188-412
Cow position: chr21:37718446-37718230 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 183, 35

Conread position: 188-424
Cow position: chr21:21181175-21181415 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 33

Conread position: 189-373
Cow position: chr21:23397849-23397667 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 33

Conread position: 189-409
Cow position: chr21:47715543-47715327 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 92, 22

Conread position: 189-424
Cow position: chr21:39509390-39509151 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 35

Conread position: 192-385
Cow position: chr21:36371488-36371676 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 236-424
Cow position: chr21:13418191-13418001 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 132, 155

Conread position: 260-424
Cow position: chr21:17807070-17806901 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 131

Conread position: 270-424
Cow position: chr21:26147151-26147316 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 123

Show alignments to all cow chromosomes.