Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-194 |
| Cow position: | chr22:12637408-12637604 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 153, 49 |
| Conread position: | 1-239 |
| Cow position: | chr22:31497377-31497122 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 127, 83 |
| Conread position: | 1-361 |
| Cow position: | chr22:34726400-34726766 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 131, 40 |
| Conread position: | 1-369 |
| Cow position: | chr22:4161882-4161511 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 1-386 |
| Cow position: | chr22:15398852-15398450 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 83 |
| Conread position: | 1-412 |
| Cow position: | chr22:23010206-23009789 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 1-424 |
| Cow position: | chr22:32221388-32221802 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 2-294 |
| Cow position: | chr22:2070698-2070992 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 127, 80 |
| Conread position: | 3-382 |
| Cow position: | chr22:26057118-26057503 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 85 |
| Conread position: | 4-191 |
| Cow position: | chr22:31513364-31513166 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 190 |
| Conread position: | 4-290 |
| Cow position: | chr22:11746173-11745877 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 125, 24 |
| Conread position: | 4-344 |
| Cow position: | chr22:11258007-11257663 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 85 |
| Conread position: | 4-424 |
| Cow position: | chr22:11778881-11778440 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 5-347 |
| Cow position: | chr22:42605366-42605725 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 5-398 |
| Cow position: | chr22:29441526-29441126 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 5-404 |
| Cow position: | chr22:22997205-22997622 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 5-408 |
| Cow position: | chr22:2913009-2913427 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 6-417 |
| Cow position: | chr22:22029629-22029220 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 160, 76 |
| Conread position: | 7-339 |
| Cow position: | chr22:9520882-9521224 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 39 |
| Conread position: | 7-369 |
| Cow position: | chr22:34616041-34616416 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 75 |
| Conread position: | 7-404 |
| Cow position: | chr22:45355118-45355522 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 77 |
| Conread position: | 9-424 |
| Cow position: | chr22:42946319-42945887 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 11-369 |
| Cow position: | chr22:23861407-23861046 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 132, 35 |
| Conread position: | 11-382 |
| Cow position: | chr22:27223868-27224250 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 72 |
| Conread position: | 11-388 |
| Cow position: | chr22:39294007-39293614 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 17 |
| Conread position: | 11-424 |
| Cow position: | chr22:7302109-7301670 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 16-329 |
| Cow position: | chr22:44514997-44514687 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 21-412 |
| Cow position: | chr22:26941544-26941942 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 66 |
| Conread position: | 25-406 |
| Cow position: | chr22:41388868-41389254 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 26-235 |
| Cow position: | chr22:39038209-39038002 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 26-404 |
| Cow position: | chr22:30471942-30471534 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 33-412 |
| Cow position: | chr22:5622960-5622569 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 36-404 |
| Cow position: | chr22:25714771-25715150 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 48 |
| Conread position: | 40-386 |
| Cow position: | chr22:14118739-14119104 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 50-369 |
| Cow position: | chr22:19040594-19040257 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 52-343 |
| Cow position: | chr22:33918122-33917833 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 63-409 |
| Cow position: | chr22:23581048-23580694 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 83-424 |
| Cow position: | chr22:9466420-9466780 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 88-356 |
| Cow position: | chr22:26376078-26376362 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 98-398 |
| Cow position: | chr22:43352351-43352049 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 113-409 |
| Cow position: | chr22:18487075-18486778 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 142-381 |
| Cow position: | chr22:12535896-12535660 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 158-422 |
| Cow position: | chr22:139400-139143 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 134, 25 |
| Conread position: | 162-398 |
| Cow position: | chr22:26760615-26760851 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 188-386 |
| Cow position: | chr22:15358176-15358373 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 188-409 |
| Cow position: | chr22:26763963-26764179 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 188-409 |
| Cow position: | chr22:33386576-33386359 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 183, 34 |
| Conread position: | 188-424 |
| Cow position: | chr22:5928030-5927793 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 189-348 |
| Cow position: | chr22:36280173-36280331 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 189-381 |
| Cow position: | chr22:13274414-13274603 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 178, 31 |
| Conread position: | 189-386 |
| Cow position: | chr22:10649847-10649653 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 182, 41 |
| Conread position: | 189-422 |
| Cow position: | chr22:34675453-34675689 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 175, 40 |
| Conread position: | 189-424 |
| Cow position: | chr22:17780792-17780559 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 178, 15 |
| Conread position: | 193-372 |
| Cow position: | chr22:15928713-15928539 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 218-424 |
| Cow position: | chr22:32053330-32053545 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 175 |
| Conread position: | 222-404 |
| Cow position: | chr22:22999553-22999737 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 225-396 |
| Cow position: | chr22:29868643-29868473 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 225-398 |
| Cow position: | chr22:31192611-31192439 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 146, 89 |
| Conread position: | 226-424 |
| Cow position: | chr22:15424099-15424306 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 229-383 |
| Cow position: | chr22:21650136-21650293 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 232-424 |
| Cow position: | chr22:4036550-4036746 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 234-424 |
| Cow position: | chr22:17184716-17184514 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 241-404 |
| Cow position: | chr22:7287487-7287657 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 156 |
| Conread position: | 259-409 |
| Cow position: | chr22:32690439-32690289 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 139, 27 |
Show alignments to all cow chromosomes.