Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-363 |
| Cow position: | chr23:20752744-20753116 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 1-372 |
| Cow position: | chr23:14839004-14838627 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 125, 49 |
| Conread position: | 1-379 |
| Cow position: | chr23:8930381-8930011 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 1-409 |
| Cow position: | chr23:20171310-20171738 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 1-409 |
| Cow position: | chr23:22660838-22660432 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 34 |
| Conread position: | 3-340 |
| Cow position: | chr23:16058332-16058677 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 81 |
| Conread position: | 3-398 |
| Cow position: | chr23:19636530-19636119 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 4-348 |
| Cow position: | chr23:20781556-20781903 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 4-349 |
| Cow position: | chr23:21630969-21631310 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 4-363 |
| Cow position: | chr23:40526234-40525874 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 124, 44 |
| Conread position: | 4-370 |
| Cow position: | chr23:9641685-9641317 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 4-384 |
| Cow position: | chr23:16237526-16237125 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 4-409 |
| Cow position: | chr23:37224332-37223916 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 80 |
| Conread position: | 4-424 |
| Cow position: | chr23:14126309-14126740 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 6-409 |
| Cow position: | chr23:5389437-5389856 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 7-351 |
| Cow position: | chr23:23470691-23471033 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 7-381 |
| Cow position: | chr23:35363036-35362650 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 122, 72 |
| Conread position: | 10-326 |
| Cow position: | chr23:7550909-7550581 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 10-423 |
| Cow position: | chr23:10424601-10424980 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 11-369 |
| Cow position: | chr23:9711848-9711480 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 11-370 |
| Cow position: | chr23:22588529-22588163 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 115, 73 |
| Conread position: | 11-376 |
| Cow position: | chr23:29459347-29458976 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 11-381 |
| Cow position: | chr23:28700743-28701115 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 73 |
| Conread position: | 11-423 |
| Cow position: | chr23:29271858-29272286 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 13-420 |
| Cow position: | chr23:17092745-17092328 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 15-379 |
| Cow position: | chr23:11434511-11434134 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 16-283 |
| Cow position: | chr23:19979202-19978929 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 17-386 |
| Cow position: | chr23:792285-791902 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 19-424 |
| Cow position: | chr23:21866506-21866918 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 306 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 112, 49 |
| Conread position: | 21-381 |
| Cow position: | chr23:3140615-3140978 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 21-424 |
| Cow position: | chr23:28721448-28721061 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 22-411 |
| Cow position: | chr23:15872949-15872533 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 23-398 |
| Cow position: | chr23:13359573-13359970 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 117, 59 |
| Conread position: | 25-369 |
| Cow position: | chr23:16700284-16699926 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 111, 57 |
| Conread position: | 25-385 |
| Cow position: | chr23:40862094-40862479 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 31-369 |
| Cow position: | chr23:1203962-1203612 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 36-376 |
| Cow position: | chr23:18821595-18821265 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 132, 48 |
| Conread position: | 39-386 |
| Cow position: | chr23:30307677-30308041 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 29 |
| Conread position: | 39-424 |
| Cow position: | chr23:40891130-40891535 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 88-409 |
| Cow position: | chr23:16793412-16793737 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 89-398 |
| Cow position: | chr23:40651646-40651328 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 144 |
| Conread position: | 90-398 |
| Cow position: | chr23:26050866-26051183 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 92-424 |
| Cow position: | chr23:17000554-17000874 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 200, 36 |
| Conread position: | 93-409 |
| Cow position: | chr23:20585857-20585544 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 101-424 |
| Cow position: | chr23:26861284-26861609 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 107-309 |
| Cow position: | chr23:24516034-24515834 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 65 |
| Conread position: | 109-424 |
| Cow position: | chr23:16072484-16072174 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 129-369 |
| Cow position: | chr23:29393310-29393547 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 131-329 |
| Cow position: | chr23:6031743-6031951 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 148-424 |
| Cow position: | chr23:23192258-23191987 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 152-380 |
| Cow position: | chr23:35498125-35497900 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 159-377 |
| Cow position: | chr23:28895049-28894831 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 164-422 |
| Cow position: | chr23:14840601-14840342 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 54 |
| Conread position: | 188-423 |
| Cow position: | chr23:26217499-26217731 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 189-424 |
| Cow position: | chr23:21276085-21275842 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 190-412 |
| Cow position: | chr23:18326745-18326962 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 177, 32 |
| Conread position: | 191-377 |
| Cow position: | chr23:14543283-14543099 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 168, 31 |
| Conread position: | 198-421 |
| Cow position: | chr23:36082527-36082754 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 200-424 |
| Cow position: | chr23:7611217-7611436 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 198, 14 |
| Conread position: | 200-424 |
| Cow position: | chr23:35155322-35155551 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 23 |
| Conread position: | 227-389 |
| Cow position: | chr23:18495771-18495932 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 233-407 |
| Cow position: | chr23:21847729-21847909 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 163 |
| Conread position: | 236-381 |
| Cow position: | chr23:13319923-13320065 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 45 |
| Conread position: | 239-424 |
| Cow position: | chr23:38941603-38941798 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 110 |
Show alignments to all cow chromosomes.