Cow genome map
| Conread name: | Pla1-C0000935_B03 |
| Conread position: | 1-412 |
| Cow position: | chr26:16604031-16604461 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 3-398 |
| Cow position: | chr26:8651827-8651450 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 3-424 |
| Cow position: | chr26:9666661-9666225 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 4-377 |
| Cow position: | chr26:9064096-9064476 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 140, 78 |
| Conread position: | 5-347 |
| Cow position: | chr26:34031851-34032202 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 124, 70 |
| Conread position: | 5-424 |
| Cow position: | chr26:2196840-2196400 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 5-424 |
| Cow position: | chr26:2770086-2769651 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 5-424 |
| Cow position: | chr26:14080467-14080894 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 11-191 |
| Cow position: | chr26:19769329-19769144 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 122, 71 |
| Conread position: | 11-357 |
| Cow position: | chr26:14924255-14924599 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 130, 65 |
| Conread position: | 11-366 |
| Cow position: | chr26:33227562-33227918 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 11-424 |
| Cow position: | chr26:17288962-17289379 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 11-424 |
| Cow position: | chr26:21859580-21860012 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 101, 71 |
| Conread position: | 13-369 |
| Cow position: | chr26:2408950-2408601 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 14-421 |
| Cow position: | chr26:12668959-12669381 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 15-424 |
| Cow position: | chr26:9632610-9632173 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 316 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 19-398 |
| Cow position: | chr26:17204374-17203987 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 43-386 |
| Cow position: | chr26:3756021-3756366 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 61-409 |
| Cow position: | chr26:19110708-19111083 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 83-424 |
| Cow position: | chr26:10292422-10292785 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 84-386 |
| Cow position: | chr26:30605537-30605219 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 49, 228 |
| Conread position: | 84-424 |
| Cow position: | chr26:32866062-32865711 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 149-404 |
| Cow position: | chr26:21578176-21577935 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 151-412 |
| Cow position: | chr26:29244311-29244569 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 154-381 |
| Cow position: | chr26:3019499-3019275 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 159-408 |
| Cow position: | chr26:18719178-18719424 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 208, 24 |
| Conread position: | 181-381 |
| Cow position: | chr26:32215387-32215588 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 182-386 |
| Cow position: | chr26:11568026-11567826 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 185, 41 |
| Conread position: | 187-424 |
| Cow position: | chr26:27585724-27585963 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 175, 35 |
| Conread position: | 188-372 |
| Cow position: | chr26:17155372-17155197 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 188-404 |
| Cow position: | chr26:7162465-7162246 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 189-384 |
| Cow position: | chr26:34119086-34118889 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 191-409 |
| Cow position: | chr26:19903333-19903551 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 94, 31 |
| Conread position: | 205-377 |
| Cow position: | chr26:31466644-31466820 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 209-409 |
| Cow position: | chr26:12519997-12520199 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 220-388 |
| Cow position: | chr26:6470297-6470126 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 222-396 |
| Cow position: | chr26:24183065-24182893 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 114 |
| Conread position: | 229-386 |
| Cow position: | chr26:19935370-19935214 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 133, 12 |
| Conread position: | 241-409 |
| Cow position: | chr26:10523449-10523282 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 157, 67 |
| Conread position: | 246-424 |
| Cow position: | chr26:10137738-10137551 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 251-404 |
| Cow position: | chr26:19768799-19768640 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 256-424 |
| Cow position: | chr26:7387779-7387954 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 139 |
Show alignments to all cow chromosomes.