Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 78
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 26
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 68
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 82
               

               Conread position:
               2-409
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 82
               

               Conread position:
               3-191
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               126, 47
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               4-377
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               127, 42
               

               Conread position:
               5-411
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 83
               

               Conread position:
               5-422
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 37
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               9-189
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               111, 73
               

               Conread position:
               9-379
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               10-424
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               11-386
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 73
               

               Conread position:
               11-387
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               11-421
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               14-279
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 68
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 27
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               102, 53
               

               Conread position:
               17-424
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               19-379
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 57
               

               Conread position:
               19-386
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 65
               

               Conread position:
               19-386
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 49
               

               Conread position:
               22-361
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               25-424
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               34-409
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 52
               

               Conread position:
               36-398
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               37-347
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               62-363
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               89-424
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               97-404
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               109-348
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               148-424
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               161-424
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               164-424
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 54
               

               Conread position:
               182-368
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               188-390
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               188-412
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               188-419
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               174, 35
               

               Conread position:
               189-340
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               189-378
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               189-381
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               173, 31
               

               Conread position:
               189-409
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               178, 48
               

               Conread position:
               189-422
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 31
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               190-397
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               92, 6
               

               Conread position:
               190-421
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               193-378
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               193-424
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               174, 29
               

               Conread position:
               197-424
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               201-398
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               206-349
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.