Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-220
Cow position: chr4:23853926-23854149 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 81

Conread position: 1-262
Cow position: chr4:30960240-30960499 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 41

Conread position: 1-283
Cow position: chr4:30690446-30690730 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 151, 81

Conread position: 1-291
Cow position: chr4:4736759-4737038 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 43

Conread position: 1-296
Cow position: chr4:26469366-26469650 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 85

Conread position: 1-310
Cow position: chr4:28399685-28399371 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 60

Conread position: 1-314
Cow position: chr4:16339870-16339554 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 122, 41

Conread position: 1-342
Cow position: chr4:28377927-28377588 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 1-381
Cow position: chr4:22528665-22528269 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 41

Conread position: 1-408
Cow position: chr4:27997406-27997832 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 1-424
Cow position: chr4:23311538-23311103 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 125, 42

Conread position: 1-424
Cow position: chr4:45918753-45919200 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 41

Conread position: 1-424
Cow position: chr4:65406638-65406210 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 48

Conread position: 2-424
Cow position: chr4:25972622-25973065 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 68

Conread position: 3-175
Cow position: chr4:1915854-1915681 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 79

Conread position: 3-346
Cow position: chr4:39231799-39231442 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 79

Conread position: 3-424
Cow position: chr4:10992476-10992034 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 43

Conread position: 4-290
Cow position: chr4:37828110-37827827 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 191, 78

Conread position: 4-321
Cow position: chr4:51866717-51867049 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 83

Conread position: 4-377
Cow position: chr4:25906598-25906228 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 128, 38

Conread position: 4-386
Cow position: chr4:21365139-21365525 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 38

Conread position: 4-388
Cow position: chr4:9845649-9846038 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 30

Conread position: 4-399
Cow position: chr4:44665642-44665237 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 83

Conread position: 4-409
Cow position: chr4:24187894-24187455 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 4-419
Cow position: chr4:51122782-51123225 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 72

Conread position: 4-424
Cow position: chr4:20279065-20279489 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 38

Conread position: 5-344
Cow position: chr4:33395962-33395617 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 127, 36

Conread position: 5-369
Cow position: chr4:23066042-23065675 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 79

Conread position: 5-398
Cow position: chr4:26373946-26373543 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 82

Conread position: 5-421
Cow position: chr4:45235134-45234713 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 83

Conread position: 5-422
Cow position: chr4:12697374-12697794 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 37

Conread position: 6-408
Cow position: chr4:17379091-17378701 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 169, 76

Conread position: 7-271
Cow position: chr4:61191201-61191457 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 122, 21

Conread position: 7-369
Cow position: chr4:7213857-7213493 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 50

Conread position: 7-370
Cow position: chr4:22115334-22115711 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 77

Conread position: 7-371
Cow position: chr4:25369844-25370213 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 93

Conread position: 7-386
Cow position: chr4:36813100-36813501 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 7-386
Cow position: chr4:40623354-40622979 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 116, 10

Conread position: 8-347
Cow position: chr4:53763390-53763044 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 75

Conread position: 9-404
Cow position: chr4:6443350-6442947 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 286
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 36

Conread position: 10-421
Cow position: chr4:52225740-52226162 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 77

Conread position: 11-290
Cow position: chr4:9912460-9912752 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 59

Conread position: 11-349
Cow position: chr4:36755481-36755826 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 11-370
Cow position: chr4:23494665-23495027 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 31

Conread position: 11-381
Cow position: chr4:61624858-61624468 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 122, 32

Conread position: 12-260
Cow position: chr4:61399692-61399449 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 30

Conread position: 13-388
Cow position: chr4:33030295-33030673 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 30

Conread position: 15-384
Cow position: chr4:40823379-40822991 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 107, 67

Conread position: 15-412
Cow position: chr4:5797703-5798114 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 74

Conread position: 15-424
Cow position: chr4:18439837-18439409 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 61

Conread position: 15-424
Cow position: chr4:22249707-22249283 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 31

Conread position: 15-424
Cow position: chr4:35471068-35471484 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 77

Conread position: 16-408
Cow position: chr4:2121658-2121256 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 115, 12

Conread position: 17-386
Cow position: chr4:31172404-31172795 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 71

Conread position: 17-390
Cow position: chr4:35869953-35870333 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 65

Conread position: 18-398
Cow position: chr4:1374128-1374492 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 65

Conread position: 21-298
Cow position: chr4:38181423-38181711 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 62

Conread position: 21-412
Cow position: chr4:30131103-30131485 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 41

Conread position: 21-424
Cow position: chr4:60030683-60031070 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 31-412
Cow position: chr4:3440158-3440556 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 92, 51

Conread position: 31-424
Cow position: chr4:65842010-65841606 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 44

Conread position: 33-352
Cow position: chr4:13406459-13406797 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 50

Conread position: 38-409
Cow position: chr4:21073390-21073008 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 25

Conread position: 47-369
Cow position: chr4:21258984-21259318 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 33

Conread position: 47-424
Cow position: chr4:9547747-9548119 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 21

Conread position: 49-341
Cow position: chr4:41602618-41602927 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 33

Conread position: 56-424
Cow position: chr4:36945415-36945038 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 26

Conread position: 63-369
Cow position: chr4:30671608-30671310 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 21

Conread position: 70-424
Cow position: chr4:36929104-36929477 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 12

Conread position: 84-424
Cow position: chr4:58858361-58858011 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 152

Conread position: 85-424
Cow position: chr4:39767148-39767516 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 273

Conread position: 93-398
Cow position: chr4:50769958-50769631 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 106

Conread position: 110-381
Cow position: chr4:22235173-22235445 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 32

Conread position: 116-384
Cow position: chr4:52087773-52088047 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 118

Conread position: 141-424
Cow position: chr4:51605745-51605454 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 88

Conread position: 147-377
Cow position: chr4:54921200-54920976 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 176, 31

Conread position: 148-372
Cow position: chr4:33667083-33667305 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 43

Conread position: 152-409
Cow position: chr4:30747-30493 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 69

Conread position: 159-368
Cow position: chr4:48283382-48283183 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 159-424
Cow position: chr4:54146564-54146309 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 208, 29

Conread position: 161-424
Cow position: chr4:23166806-23167064 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 159, 22

Conread position: 162-408
Cow position: chr4:21250141-21249884 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 237

Conread position: 175-398
Cow position: chr4:20066308-20066088 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 52

Conread position: 175-421
Cow position: chr4:29709853-29709601 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 27

Conread position: 188-369
Cow position: chr4:12995890-12996061 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 188-369
Cow position: chr4:53752449-53752627 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 188-398
Cow position: chr4:68795369-68795163 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 46

Conread position: 188-422
Cow position: chr4:5580483-5580718 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 108, 35

Conread position: 188-424
Cow position: chr4:23758732-23758968 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 179, 30

Conread position: 189-369
Cow position: chr4:19729171-19728999 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 189-378
Cow position: chr4:37880860-37881050 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 35

Conread position: 189-424
Cow position: chr4:5002691-5002923 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 29

Conread position: 209-424
Cow position: chr4:1799855-1800072 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 189, 20

Conread position: 215-424
Cow position: chr4:44279988-44279769 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 13

Conread position: 222-376
Cow position: chr4:38877716-38877871 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 131

Conread position: 222-421
Cow position: chr4:21862912-21862711 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 40

Conread position: 223-424
Cow position: chr4:37035279-37035068 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 18

Conread position: 235-409
Cow position: chr4:9799974-9800149 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 135, 16

Conread position: 235-424
Cow position: chr4:24432948-24433146 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 12

Conread position: 241-420
Cow position: chr4:17304420-17304239 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 154

Conread position: 241-424
Cow position: chr4:24415539-24415720 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 40

Show alignments to all cow chromosomes.