Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 81
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               151, 81
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               159, 60
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               311
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               312
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               2-424
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               121, 68
               

               Conread position:
               3-175
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               127, 79
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               120, 79
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               191, 78
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 83
               

               Conread position:
               4-377
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               4-386
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               4-388
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               111, 30
               

               Conread position:
               4-399
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 83
               

               Conread position:
               4-409
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               4-419
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 38
               

               Conread position:
               5-344
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               127, 36
               

               Conread position:
               5-369
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               118, 79
               

               Conread position:
               5-398
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               5-421
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               152, 83
               

               Conread position:
               5-422
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 37
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               169, 76
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               122, 21
               

               Conread position:
               7-369
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               89, 50
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 77
               

               Conread position:
               7-371
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 93
               

               Conread position:
               7-386
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 78
               

               Conread position:
               7-386
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               8-347
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               9-404
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               10-421
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 77
               

               Conread position:
               11-290
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               11-349
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               11-370
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               11-381
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               12-260
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               117, 30
               

               Conread position:
               13-388
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               15-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               107, 67
               

               Conread position:
               15-412
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               15-424
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               16-408
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               17-386
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               17-390
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 65
               

               Conread position:
               18-398
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               21-298
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               21-412
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               21-424
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               31-412
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               92, 51
               

               Conread position:
               31-424
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               101, 44
               

               Conread position:
               33-352
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 50
               

               Conread position:
               38-409
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               47-369
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               47-424
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               49-341
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               56-424
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               63-369
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               70-424
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               84-424
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 152
               

               Conread position:
               85-424
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               44, 273
               

               Conread position:
               93-398
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               110-381
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               116-384
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 118
               

               Conread position:
               141-424
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 88
               

               Conread position:
               147-377
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               176, 31
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               152-409
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               159-368
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               159-424
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               208, 29
               

               Conread position:
               161-424
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               159, 22
               

               Conread position:
               162-408
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 237
               

               Conread position:
               175-398
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               175-421
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               188-369
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               188-369
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               188-398
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               188-422
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               179, 30
               

               Conread position:
               189-369
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               189-378
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 35
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               209-424
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               189, 20
               

               Conread position:
               215-424
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               222-376
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               222-421
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               223-424
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               235-409
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               235-424
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               241-420
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               241-424
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 40
               
Show alignments to all cow chromosomes.