Cow genome map


           Conread name:
           Pla1-C0000935_B03
        

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               128, 82
               

               Conread position:
               1-348
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 41
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 84
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 81
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               284, 35
               

               Conread position:
               2-409
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               3-369
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               126, 77
               

               Conread position:
               4-194
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               4-343
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               4-386
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               287, 38
               

               Conread position:
               4-409
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               322
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 80
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               5-363
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               5-370
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 77
               

               Conread position:
               5-372
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               5-406
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               5-409
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               5-409
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               7-369
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               8-369
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               8-424
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               9-380
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 76
               

               Conread position:
               10-191
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               10-379
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               121, 73
               

               Conread position:
               11-359
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 73
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 70
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               11-412
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               12-380
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               14-370
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 68
               

               Conread position:
               14-381
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               15-369
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 69
               

               Conread position:
               16-409
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               113, 20
               

               Conread position:
               18-421
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               111, 28
               

               Conread position:
               21-370
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               22-424
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               25-384
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               25-409
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               27-180
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               27-409
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               31-376
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               121, 51
               

               Conread position:
               31-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               207, 51
               

               Conread position:
               33-424
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               35-398
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               83-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               84-369
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               91-403
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               91-424
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 148
               

               Conread position:
               94-367
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               101-406
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               102-305
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               132-409
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               141-424
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               154-379
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               154-409
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               155-421
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               243, 28
               

               Conread position:
               159-390
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               165-381
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 5
               

               Conread position:
               188-398
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               100, 35
               

               Conread position:
               188-409
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               101, 32
               

               Conread position:
               188-422
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               135, 34
               

               Conread position:
               188-424
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               189-358
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               189-372
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 42
               

               Conread position:
               189-380
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               107, 32
               

               Conread position:
               189-384
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               189-424
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               191-376
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               191-414
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               101, 37
               

               Conread position:
               191-424
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 5
               

               Conread position:
               193-400
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               174, 34
               

               Conread position:
               193-424
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               220-424
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               224-409
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               226-424
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 170
               

               Conread position:
               227-422
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               234-381
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               234-424
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               235-424
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               43, 164
               

               Conread position:
               242-380
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-412
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               260-424
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               111, 131
               

               Conread position:
               263-409
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               278-405
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 74
               
Show alignments to all cow chromosomes.