Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-298
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 16

Conread position: 1-353
Cow position:
Alignm length: 364
Alignm identity: 251
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 131, 87

Conread position: 1-369
Cow position:
Alignm length: 397
Alignm identity: 271
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 128, 23

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 268
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 132, 41

Conread position: 1-381
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 85

Conread position: 1-384
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 131, 40

Conread position: 1-396
Cow position:
Alignm length: 400
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 84

Conread position: 1-396
Cow position:
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 78

Conread position: 1-398
Cow position:
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 1-404
Cow position:
Alignm length: 421
Alignm identity: 274
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 128, 47

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 81

Conread position: 1-409
Cow position:
Alignm length: 435
Alignm identity: 286
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 128, 28

Conread position: 1-420
Cow position:
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 82

Conread position: 1-422
Cow position:
Alignm length: 451
Alignm identity: 300
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 41

Conread position: 2-369
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 69

Conread position: 3-363
Cow position:
Alignm length: 375
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 39

Conread position: 3-398
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 40

Conread position: 4-277
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 38

Conread position: 4-289
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 23

Conread position: 4-352
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 79

Conread position: 4-369
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 86

Conread position: 4-369
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 4-381
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 4-386
Cow position:
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 30

Conread position: 4-389
Cow position:
Alignm length: 407
Alignm identity: 277
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 81

Conread position: 4-396
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 160, 31

Conread position: 4-409
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 80

Conread position: 4-422
Cow position:
Alignm length: 445
Alignm identity: 298
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 98, 19

Conread position: 4-424
Cow position:
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 42

Conread position: 5-384
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 124, 80

Conread position: 5-409
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 291, 52

Conread position: 5-423
Cow position:
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 363

Conread position: 5-424
Cow position:
Alignm length: 439
Alignm identity: 293
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 127, 37

Conread position: 5-424
Cow position:
Alignm length: 440
Alignm identity: 294
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 83

Conread position: 6-293
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 37, 73

Conread position: 6-302
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 7

Conread position: 6-409
Cow position:
Alignm length: 427
Alignm identity: 278
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 40

Conread position: 6-412
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 70

Conread position: 7-378
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 33

Conread position: 7-399
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 80

Conread position: 8-421
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 74

Conread position: 11-271
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 77

Conread position: 11-349
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 35

Conread position: 11-369
Cow position:
Alignm length: 366
Alignm identity: 248
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 147, 69

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 288
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 55, 21

Conread position: 11-421
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 32, 74

Conread position: 11-424
Cow position:
Alignm length: 428
Alignm identity: 289
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 112, 32

Conread position: 12-368
Cow position:
Alignm length: 370
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 121, 15

Conread position: 12-368
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 71

Conread position: 12-404
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 73

Conread position: 13-340
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 29

Conread position: 13-347
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 110, 71

Conread position: 13-376
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 78

Conread position: 15-281
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 67

Conread position: 15-349
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 28, 68

Conread position: 17-231
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 112, 67

Conread position: 19-412
Cow position:
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 20-409
Cow position:
Alignm length: 418
Alignm identity: 287
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 63

Conread position: 21-368
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 63

Conread position: 21-369
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 63

Conread position: 27-404
Cow position:
Alignm length: 409
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 108, 57

Conread position: 33-398
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 88, 53

Conread position: 35-398
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 49

Conread position: 36-375
Cow position:
Alignm length: 345
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 32

Conread position: 36-412
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 75, 46

Conread position: 36-424
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 328, 46

Conread position: 37-371
Cow position:
Alignm length: 355
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 35

Conread position: 37-409
Cow position:
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 47

Conread position: 46-386
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 87, 36

Conread position: 48-375
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 81, 39

Conread position: 69-341
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 15

Conread position: 69-367
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 15

Conread position: 85-421
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 169

Conread position: 85-424
Cow position:
Alignm length: 363
Alignm identity: 261
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 147

Conread position: 88-424
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 52, 23

Conread position: 94-424
Cow position:
Alignm length: 359
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 188

Conread position: 98-415
Cow position:
Alignm length: 321
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 72

Conread position: 99-381
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 96

Conread position: 117-408
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 12

Conread position: 141-363
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 65

Conread position: 141-409
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 96

Conread position: 141-412
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 26

Conread position: 147-424
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 20

Conread position: 148-332
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 151-424
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 252, 24

Conread position: 155-381
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 28

Conread position: 155-404
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 243, 14

Conread position: 175-398
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 55

Conread position: 175-424
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 46

Conread position: 182-409
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 187, 40

Conread position: 183-404
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 5

Conread position: 188-369
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 188-398
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 108, 34

Conread position: 188-404
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 34

Conread position: 188-412
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 176, 34

Conread position: 189-351
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 189-366
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 189-369
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 33

Conread position: 189-369
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 136, 32

Conread position: 189-379
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 33

Conread position: 189-386
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 185, 39

Conread position: 189-424
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 185, 25

Conread position: 191-386
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 32

Conread position: 191-409
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 23

Conread position: 194-412
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 25

Conread position: 196-421
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 26

Conread position: 200-369
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 211-386
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 14

Conread position: 219-418
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 24

Conread position: 219-424
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 18

Conread position: 223-409
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 116

Conread position: 225-412
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 138, 9

Conread position: 226-408
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 120

Conread position: 227-395
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 237-424
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 161, 35

Conread position: 247-409
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 5

Conread position: 265-409
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 130

Show alignments to all cow chromosomes.