Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-232
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 45

Conread position: 1-316
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 122, 41

Conread position: 1-329
Cow position:
Alignm length: 350
Alignm identity: 244
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 130, 55

Conread position: 1-342
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 83

Conread position: 1-347
Cow position:
Alignm length: 351
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 290, 42

Conread position: 1-347
Cow position:
Alignm length: 357
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 58

Conread position: 1-347
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 119, 83

Conread position: 1-372
Cow position:
Alignm length: 385
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 106

Conread position: 1-376
Cow position:
Alignm length: 403
Alignm identity: 281
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 128, 32

Conread position: 1-379
Cow position:
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 42

Conread position: 1-380
Cow position:
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 83

Conread position: 1-385
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 82

Conread position: 1-409
Cow position:
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 79

Conread position: 1-424
Cow position:
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 83

Conread position: 1-424
Cow position:
Alignm length: 444
Alignm identity: 297
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 69

Conread position: 1-424
Cow position:
Alignm length: 444
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 16

Conread position: 1-424
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 45

Conread position: 3-260
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 122, 82

Conread position: 3-266
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 158, 39

Conread position: 3-309
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 83

Conread position: 3-360
Cow position:
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 39

Conread position: 3-368
Cow position:
Alignm length: 372
Alignm identity: 250
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 78

Conread position: 4-290
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 119, 28

Conread position: 4-347
Cow position:
Alignm length: 367
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 42

Conread position: 4-362
Cow position:
Alignm length: 388
Alignm identity: 262
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 13, 82

Conread position: 4-370
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 75

Conread position: 4-424
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 24

Conread position: 5-344
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 65

Conread position: 5-354
Cow position:
Alignm length: 367
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 124, 82

Conread position: 5-386
Cow position:
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 82

Conread position: 5-409
Cow position:
Alignm length: 424
Alignm identity: 292
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 120, 48

Conread position: 5-413
Cow position:
Alignm length: 435
Alignm identity: 295
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 37

Conread position: 5-420
Cow position:
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 37

Conread position: 5-424
Cow position:
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 71

Conread position: 6-347
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 23

Conread position: 6-376
Cow position:
Alignm length: 390
Alignm identity: 262
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 134, 25

Conread position: 6-424
Cow position:
Alignm length: 439
Alignm identity: 297
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 98, 35

Conread position: 7-290
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 75

Conread position: 7-361
Cow position:
Alignm length: 384
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 77

Conread position: 7-398
Cow position:
Alignm length: 419
Alignm identity: 283
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 79, 70

Conread position: 7-409
Cow position:
Alignm length: 422
Alignm identity: 291
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 46

Conread position: 7-409
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 136, 75

Conread position: 7-416
Cow position:
Alignm length: 420
Alignm identity: 277
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 69

Conread position: 7-424
Cow position:
Alignm length: 445
Alignm identity: 307
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 78

Conread position: 7-424
Cow position:
Alignm length: 439
Alignm identity: 291
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 122, 36

Conread position: 8-369
Cow position:
Alignm length: 387
Alignm identity: 281
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 38

Conread position: 8-380
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 115, 34

Conread position: 9-371
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 73

Conread position: 10-369
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 118, 74

Conread position: 10-385
Cow position:
Alignm length: 393
Alignm identity: 271
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 170, 58

Conread position: 11-404
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 31

Conread position: 11-409
Cow position:
Alignm length: 406
Alignm identity: 278
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 59

Conread position: 11-424
Cow position:
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 57

Conread position: 11-424
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 112, 31

Conread position: 12-386
Cow position:
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 72

Conread position: 12-409
Cow position:
Alignm length: 413
Alignm identity: 271
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 52

Conread position: 13-386
Cow position:
Alignm length: 402
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 18

Conread position: 15-369
Cow position:
Alignm length: 372
Alignm identity: 253
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 31

Conread position: 15-384
Cow position:
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 27

Conread position: 16-358
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 68

Conread position: 16-420
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 17-372
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 157, 25

Conread position: 22-372
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 20

Conread position: 22-424
Cow position:
Alignm length: 441
Alignm identity: 309
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 106, 20

Conread position: 24-352
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 105, 60

Conread position: 24-369
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 31

Conread position: 26-424
Cow position:
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 16

Conread position: 29-398
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 113, 54

Conread position: 33-245
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 50

Conread position: 35-395
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 48

Conread position: 36-424
Cow position:
Alignm length: 411
Alignm identity: 277
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 44

Conread position: 39-347
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 63, 44

Conread position: 40-227
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 44

Conread position: 40-382
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 9

Conread position: 55-349
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 68, 29

Conread position: 57-424
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 27

Conread position: 61-412
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 23

Conread position: 80-424
Cow position:
Alignm length: 383
Alignm identity: 257
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 254

Conread position: 84-325
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 172

Conread position: 84-404
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 25

Conread position: 85-373
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 108

Conread position: 85-419
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 16

Conread position: 88-376
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 160

Conread position: 88-386
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 155

Conread position: 89-420
Cow position:
Alignm length: 339
Alignm identity: 228
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 49

Conread position: 90-377
Cow position:
Alignm length: 304
Alignm identity: 222
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 107

Conread position: 90-409
Cow position:
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 90-412
Cow position:
Alignm length: 347
Alignm identity: 249
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 39, 153

Conread position: 91-381
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 78

Conread position: 110-373
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 80

Conread position: 142-384
Cow position:
Alignm length: 253
Alignm identity: 167
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 142-412
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 122

Conread position: 146-336
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 48

Conread position: 146-419
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 90

Conread position: 154-349
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 183-352
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 41

Conread position: 188-381
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 135, 30

Conread position: 188-406
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 179, 34

Conread position: 188-424
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 31

Conread position: 189-360
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 39

Conread position: 189-369
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 131, 42

Conread position: 189-373
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 108

Conread position: 189-396
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 178, 33

Conread position: 189-409
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 185, 41

Conread position: 189-410
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 29

Conread position: 189-419
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 120, 33

Conread position: 189-420
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 29

Conread position: 190-412
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 12

Conread position: 191-386
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 176, 34

Conread position: 191-424
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 26

Conread position: 195-408
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 91, 21

Conread position: 196-381
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 166, 24

Conread position: 203-398
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 164, 19

Conread position: 218-424
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 16

Conread position: 222-404
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 170

Conread position: 224-424
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 15

Conread position: 230-422
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 11

Conread position: 231-424
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 162

Conread position: 235-412
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 158

Conread position: 238-412
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 102

Conread position: 257-396
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 27

Show alignments to all cow chromosomes.