Cow genome map

Conread name: Pla1-C0000935_B03

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 131, 83

Conread position: 1-297
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 82

Conread position: 1-336
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 85

Conread position: 1-354
Cow position:
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 1-369
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 41

Conread position: 1-369
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 41

Conread position: 1-373
Cow position:
Alignm length: 392
Alignm identity: 259
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 41

Conread position: 1-381
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 83

Conread position: 1-398
Cow position:
Alignm length: 424
Alignm identity: 301
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 122, 85

Conread position: 1-409
Cow position:
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 16

Conread position: 1-422
Cow position:
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 49

Conread position: 1-424
Cow position:
Alignm length: 449
Alignm identity: 306
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 135, 35

Conread position: 1-424
Cow position:
Alignm length: 457
Alignm identity: 306
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 27

Conread position: 2-424
Cow position:
Alignm length: 443
Alignm identity: 303
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 130, 26

Conread position: 3-344
Cow position:
Alignm length: 352
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 73

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 261
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 43

Conread position: 3-404
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 41, 8

Conread position: 3-424
Cow position:
Alignm length: 454
Alignm identity: 311
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 38, 87

Conread position: 4-357
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 78

Conread position: 4-365
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 125, 9

Conread position: 4-369
Cow position:
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 38

Conread position: 4-370
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 15

Conread position: 4-381
Cow position:
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 4-386
Cow position:
Alignm length: 400
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 138, 24

Conread position: 4-398
Cow position:
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 80

Conread position: 4-398
Cow position:
Alignm length: 424
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 78

Conread position: 4-407
Cow position:
Alignm length: 433
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 129, 42

Conread position: 4-409
Cow position:
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 38

Conread position: 4-424
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 46

Conread position: 4-424
Cow position:
Alignm length: 436
Alignm identity: 292
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 23, 13

Conread position: 5-349
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 87, 35

Conread position: 5-408
Cow position:
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 79

Conread position: 5-424
Cow position:
Alignm length: 442
Alignm identity: 295
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 77

Conread position: 6-170
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 6-334
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 122, 37

Conread position: 6-386
Cow position:
Alignm length: 393
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 123, 39

Conread position: 8-423
Cow position:
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 34

Conread position: 9-290
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 120, 59

Conread position: 9-424
Cow position:
Alignm length: 444
Alignm identity: 308
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 33

Conread position: 10-377
Cow position:
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 33

Conread position: 11-218
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 57

Conread position: 11-287
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 71

Conread position: 11-287
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 118, 31

Conread position: 11-289
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 71

Conread position: 11-367
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 122, 31

Conread position: 11-369
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 119, 35

Conread position: 11-369
Cow position:
Alignm length: 383
Alignm identity: 259
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 112, 71

Conread position: 11-384
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 75

Conread position: 11-386
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 60

Conread position: 11-386
Cow position:
Alignm length: 399
Alignm identity: 278
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 17, 59

Conread position: 11-398
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 122, 44

Conread position: 11-404
Cow position:
Alignm length: 401
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 31

Conread position: 11-404
Cow position:
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 31

Conread position: 11-405
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 74

Conread position: 11-405
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 32

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 31

Conread position: 13-358
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 71

Conread position: 14-412
Cow position:
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 65

Conread position: 14-424
Cow position:
Alignm length: 431
Alignm identity: 293
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 78, 32

Conread position: 16-402
Cow position:
Alignm length: 420
Alignm identity: 288
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 7

Conread position: 16-424
Cow position:
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 34

Conread position: 20-347
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 11

Conread position: 20-410
Cow position:
Alignm length: 407
Alignm identity: 279
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 109, 56

Conread position: 20-422
Cow position:
Alignm length: 432
Alignm identity: 293
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 103, 64

Conread position: 20-424
Cow position:
Alignm length: 420
Alignm identity: 280
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 80, 22

Conread position: 20-424
Cow position:
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 53

Conread position: 21-386
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 66

Conread position: 21-408
Cow position:
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 47

Conread position: 25-410
Cow position:
Alignm length: 400
Alignm identity: 266
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 104, 17

Conread position: 31-420
Cow position:
Alignm length: 401
Alignm identity: 284
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 150, 51

Conread position: 32-424
Cow position:
Alignm length: 400
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 162, 47

Conread position: 34-291
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 50

Conread position: 34-421
Cow position:
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 50

Conread position: 42-424
Cow position:
Alignm length: 410
Alignm identity: 287
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 42

Conread position: 47-380
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 82, 37

Conread position: 52-332
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 32

Conread position: 68-409
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 16

Conread position: 85-421
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 171

Conread position: 89-424
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 168

Conread position: 90-404
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 196, 28

Conread position: 96-369
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 82

Conread position: 101-424
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 105

Conread position: 107-424
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 187

Conread position: 122-424
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 245, 19

Conread position: 140-421
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 5

Conread position: 144-357
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 85

Conread position: 154-424
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 244, 29

Conread position: 160-386
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 126, 10

Conread position: 162-395
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 205, 21

Conread position: 175-419
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 8, 54

Conread position: 188-422
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 161, 38

Conread position: 188-424
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 218, 32

Conread position: 188-424
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 35

Conread position: 189-357
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 189-404
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 34

Conread position: 189-412
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 182, 34

Conread position: 189-412
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 29

Conread position: 189-422
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 179, 31

Conread position: 189-422
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 178, 33

Conread position: 189-424
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 41

Conread position: 189-424
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 191-345
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 32

Conread position: 191-409
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 22

Conread position: 194-353
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 42

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 195-404
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 33

Conread position: 216-424
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 12

Conread position: 225-398
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 13

Conread position: 233-424
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 134, 177

Conread position: 236-400
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 153

Conread position: 246-369
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 253-422
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 136

Conread position: 253-422
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 23

Conread position: 263-419
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 87

Conread position: 273-424
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 16

Show alignments to all cow chromosomes.