Non-Coding RNA Search

Cow genome map


           Conread name:
           Pla1-C0000935_D19
        

               Conread position:
               1-135
               

               Cow position:
               chr11:23278987-23279116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-138
               

               Cow position:
               chr11:38657016-38657145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr11:39271207-39271349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-142
               

               Cow position:
               chr11:2864189-2864038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-143
               

               Cow position:
               chr11:8828176-8828039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr11:24551557-24551423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               1-147
               

               Cow position:
               chr11:33271595-33271460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr11:44016411-44016272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr11:51683382-51683244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr11:44176759-44176618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr11:43641554-43641408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr11:33369318-33369171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr11:63695673-63695825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               1-157
               

               Cow position:
               chr11:69421539-69421693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               1-157
               

               Cow position:
               chr11:80596521-80596357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr11:26057481-26057632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr11:35732917-35733065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr11:49486955-49486797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr11:63475505-63475654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               1-158
               

               Cow position:
               chr11:81175764-81175615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               129, 53
               

               Conread position:
               1-158
               

               Cow position:
               chr11:83028158-83028012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr11:11483487-11483324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               1-163
               

               Cow position:
               chr11:37042140-37041985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-166
               

               Cow position:
               chr11:68570215-68570370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr11:13843639-13843456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr11:26442337-26442500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr11:38983-38813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               1-177
               

               Cow position:
               chr11:25376678-25376500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 145
               

               Conread position:
               1-177
               

               Cow position:
               chr11:26343268-26343101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr11:43008140-43008321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr11:79548767-79548938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               1-177
               

               Cow position:
               chr11:80370280-80370114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr11:30322328-30322494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr11:63640691-63640876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 176
               

               Conread position:
               1-178
               

               Cow position:
               chr11:79666096-79666263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr11:57767355-57767186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr11:60720288-60720460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               149
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr11:58102592-58102766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr11:59916335-59916140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 192
               

               Conread position:
               1-183
               

               Cow position:
               chr11:63485098-63484932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr11:11288803-11288987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               51, 137
               

               Conread position:
               1-184
               

               Cow position:
               chr11:36917599-36917784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 116
               

               Conread position:
               1-184
               

               Cow position:
               chr11:46314179-46314003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               154, 59
               

               Conread position:
               1-186
               

               Cow position:
               chr11:9836289-9836466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr11:1980099-1980280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr11:25604119-25603935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr11:35434491-35434676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr11:60296904-60296718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr11:74152583-74152768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               172, 53
               

               Conread position:
               1-191
               

               Cow position:
               chr11:21124443-21124621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr11:25614637-25614828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 170
               

               Conread position:
               1-191
               

               Cow position:
               chr11:36361475-36361659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               155, 57
               

               Conread position:
               1-192
               

               Cow position:
               chr11:47314257-47314447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               1-192
               

               Cow position:
               chr11:81606044-81605843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 172
               

               Conread position:
               1-192
               

               Cow position:
               chr11:87171910-87172092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr11:21830045-21830226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr11:26535950-26535768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               1-197
               

               Cow position:
               chr11:18119668-18119481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr11:42084507-42084696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr11:49207877-49207691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-198
               

               Cow position:
               chr11:32782708-32782905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               1-198
               

               Cow position:
               chr11:43914459-43914270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr11:25783881-25783690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               1-200
               

               Cow position:
               chr11:47784946-47784751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr11:3896532-3896730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               1-207
               

               Cow position:
               chr11:35769053-35768854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               201, 49
               

               Conread position:
               1-207
               

               Cow position:
               chr11:66939425-66939624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               203, 53
               

               Conread position:
               1-208
               

               Cow position:
               chr11:33002133-33001932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               201, 53
               

               Conread position:
               1-210
               

               Cow position:
               chr11:69417569-69417370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-211
               

               Cow position:
               chr11:32260697-32260500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               199, 37
               

               Conread position:
               1-213
               

               Cow position:
               chr11:58938550-58938781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr11:62742482-62742680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr11:36521046-36520836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               136, 70
               

               Conread position:
               1-215
               

               Cow position:
               chr11:46747693-46747899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               201, 53
               

               Conread position:
               1-216
               

               Cow position:
               chr11:58173801-58173586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               1-216
               

               Cow position:
               chr11:73983824-73984043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-218
               

               Cow position:
               chr11:34467728-34467530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-218
               

               Cow position:
               chr11:41985882-41986087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-218
               

               Cow position:
               chr11:62889726-62889935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr11:20762018-20761804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr11:28078655-28078460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr11:78820315-78820111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr11:15382329-15382549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               193, 52
               

               Conread position:
               1-223
               

               Cow position:
               chr11:13940353-13940145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               203, 37
               

               Conread position:
               1-223
               

               Cow position:
               chr11:15772547-15772757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr11:31417589-31417374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               201, 53
               

               Conread position:
               1-223
               

               Cow position:
               chr11:35109374-35109585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               146, 11
               

               Conread position:
               1-223
               

               Cow position:
               chr11:48650152-48649926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr11:63435688-63435476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr11:64029101-64029308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               1-223
               

               Cow position:
               chr11:77750595-77750815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               1-223
               

               Cow position:
               chr11:81406001-81406208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr11:5417052-5416837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               201, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr11:6233712-6233926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:16906865-16907095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               63, 175
               

               Conread position:
               1-224
               

               Cow position:
               chr11:17721635-17721848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               201, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr11:23271840-23272050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               203, 34
               

               Conread position:
               1-224
               

               Cow position:
               chr11:27907936-27907735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:30165677-30165464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:30708671-30708460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               1-224
               

               Cow position:
               chr11:34646761-34646543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               198, 71
               

               Conread position:
               1-224
               

               Cow position:
               chr11:39462785-39462577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:45276982-45277194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               203, 71
               

               Conread position:
               1-224
               

               Cow position:
               chr11:50073121-50072891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               41, 214
               

               Conread position:
               1-224
               

               Cow position:
               chr11:53817021-53816811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               203, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr11:56311434-56311642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               203, 52
               

               Conread position:
               1-224
               

               Cow position:
               chr11:59024187-59024407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               199, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr11:62812787-62812996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:66572326-66572543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:70483685-70483897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               203, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr11:70756640-70756436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:82730818-82731044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               69, 219
               

               Conread position:
               1-224
               

               Cow position:
               chr11:83398073-83397858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:84228557-84228761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr11:2084311-2084094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               219, 53
               

               Conread position:
               1-225
               

               Cow position:
               chr11:13592905-13592687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 53
               

               Conread position:
               1-225
               

               Cow position:
               chr11:34644824-34644608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               130, 53
               

               Conread position:
               1-225
               

               Cow position:
               chr11:41213218-41212995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               1-225
               

               Cow position:
               chr11:48474875-48474656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               200, 37
               

               Conread position:
               1-225
               

               Cow position:
               chr11:67345493-67345701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               203, 53
               

               Conread position:
               1-225
               

               Cow position:
               chr11:75479856-75480067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr11:13863936-13864153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               1-226
               

               Cow position:
               chr11:17321831-17321599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               1-226
               

               Cow position:
               chr11:34144753-34144963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               197, 71
               

               Conread position:
               1-226
               

               Cow position:
               chr11:80412843-80413066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               194, 62
               

               Conread position:
               1-227
               

               Cow position:
               chr11:17859987-17860205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               203, 53
               

               Conread position:
               1-229
               

               Cow position:
               chr11:58990677-58990449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               1-230
               

               Cow position:
               chr11:68883886-68883664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               223, 62
               

               Conread position:
               1-231
               

               Cow position:
               chr11:10095509-10095289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               203, 60
               

               Conread position:
               1-231
               

               Cow position:
               chr11:38334687-38334467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               215, 37
               

               Conread position:
               1-231
               

               Cow position:
               chr11:44017150-44016920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               199, 209
               

               Conread position:
               1-231
               

               Cow position:
               chr11:53778786-53778559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               216, 67
               

               Conread position:
               1-231
               

               Cow position:
               chr11:56288711-56288489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               156, 63
               

               Conread position:
               1-231
               

               Cow position:
               chr11:85723860-85723644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               1-232
               

               Cow position:
               chr11:3740130-3739899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               87, 216
               

               Conread position:
               1-232
               

               Cow position:
               chr11:4199440-4199215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               226, 62
               

               Conread position:
               1-232
               

               Cow position:
               chr11:13042982-13043204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               215, 53
               

               Conread position:
               1-232
               

               Cow position:
               chr11:17889561-17889785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               140, 50
               

               Conread position:
               1-232
               

               Cow position:
               chr11:21843973-21844186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr11:63065818-63065599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               1-232
               

               Cow position:
               chr11:69307696-69307459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 12
               

               Conread position:
               1-233
               

               Cow position:
               chr11:6633892-6633657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               60, 207
               

               Conread position:
               1-233
               

               Cow position:
               chr11:48383696-48383471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 53
               

               Conread position:
               1-233
               

               Cow position:
               chr11:68913309-68913083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               201, 67
               

               Conread position:
               1-234
               

               Cow position:
               chr11:15369555-15369328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               201, 60
               

               Conread position:
               1-234
               

               Cow position:
               chr11:25791527-25791750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               203, 51
               

               Conread position:
               1-234
               

               Cow position:
               chr11:49149212-49148981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 47
               

               Conread position:
               1-234
               

               Cow position:
               chr11:70422429-70422648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr11:5218999-5219218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               224, 51
               

               Conread position:
               1-235
               

               Cow position:
               chr11:29659725-29659501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               203, 15
               

               Conread position:
               1-236
               

               Cow position:
               chr11:42786516-42786751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               1-250
               

               Cow position:
               chr11:41215899-41215658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               236, 29
               

               Conread position:
               3-187
               

               Cow position:
               chr11:47110420-47110242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-190
               

               Cow position:
               chr11:49396362-49396539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-230
               

               Cow position:
               chr11:9221558-9221778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               5-193
               

               Cow position:
               chr11:66099695-66099879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-224
               

               Cow position:
               chr11:82289750-82289536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               5-231
               

               Cow position:
               chr11:6399902-6400126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 56
               

               Conread position:
               6-158
               

               Cow position:
               chr11:63407855-63407714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               6-165
               

               Cow position:
               chr11:6429591-6429748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 44
               

               Conread position:
               6-171
               

               Cow position:
               chr11:63849789-63849946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-175
               

               Cow position:
               chr11:41278348-41278187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-176
               

               Cow position:
               chr11:71455991-71455823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               6-177
               

               Cow position:
               chr11:4436922-4436747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               6-177
               

               Cow position:
               chr11:81065889-81066050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               6-181
               

               Cow position:
               chr11:49210656-49210826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-189
               

               Cow position:
               chr11:12080004-12079824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-189
               

               Cow position:
               chr11:58111783-58111967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 106
               

               Conread position:
               6-190
               

               Cow position:
               chr11:42065813-42065632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               169, 48
               

               Conread position:
               6-191
               

               Cow position:
               chr11:20234847-20234670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-193
               

               Cow position:
               chr11:81041807-81041986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               6-195
               

               Cow position:
               chr11:70517417-70517612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               6-200
               

               Cow position:
               chr11:19487318-19487504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               6-206
               

               Cow position:
               chr11:31537287-31537470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               6-207
               

               Cow position:
               chr11:49255571-49255373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               6-207
               

               Cow position:
               chr11:53773844-53773650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               6-210
               

               Cow position:
               chr11:3703113-3702916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               196, 44
               

               Conread position:
               6-215
               

               Cow position:
               chr11:7874301-7874100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               6-215
               

               Cow position:
               chr11:63202086-63202288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               146, 48
               

               Conread position:
               6-216
               

               Cow position:
               chr11:74427840-74427638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               6-218
               

               Cow position:
               chr11:57503641-57503441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               198, 46
               

               Conread position:
               6-218
               

               Cow position:
               chr11:71345155-71345365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               6-219
               

               Cow position:
               chr11:35351872-35352081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               140, 66
               

               Conread position:
               6-220
               

               Cow position:
               chr11:1485699-1485918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               148, 49
               

               Conread position:
               6-220
               

               Cow position:
               chr11:17831046-17831264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               60, 173
               

               Conread position:
               6-220
               

               Cow position:
               chr11:38670851-38670641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               101, 48
               

               Conread position:
               6-220
               

               Cow position:
               chr11:64101935-64101732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               196, 48
               

               Conread position:
               6-222
               

               Cow position:
               chr11:17990076-17990282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               6-222
               

               Cow position:
               chr11:29786332-29786544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               6-223
               

               Cow position:
               chr11:5249355-5249574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               35, 144
               

               Conread position:
               6-223
               

               Cow position:
               chr11:47882985-47882756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-223
               

               Cow position:
               chr11:52690364-52690567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               214, 21
               

               Conread position:
               6-224
               

               Cow position:
               chr11:25620229-25620445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               150, 48
               

               Conread position:
               6-224
               

               Cow position:
               chr11:32254055-32254263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-224
               

               Cow position:
               chr11:39554028-39554245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               169, 48
               

               Conread position:
               6-224
               

               Cow position:
               chr11:72375505-72375729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               100, 208
               

               Conread position:
               6-225
               

               Cow position:
               chr11:18924908-18924697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               6-225
               

               Cow position:
               chr11:29677368-29677153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               174, 58
               

               Conread position:
               6-225
               

               Cow position:
               chr11:35724131-35723923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               6-225
               

               Cow position:
               chr11:37778656-37778878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               150, 52
               

               Conread position:
               6-225
               

               Cow position:
               chr11:62620537-62620326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               188, 48
               

               Conread position:
               6-227
               

               Cow position:
               chr11:5961468-5961251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               182, 44
               

               Conread position:
               6-227
               

               Cow position:
               chr11:75178059-75177845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               6-228
               

               Cow position:
               chr11:65058451-65058670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               170, 55
               

               Conread position:
               6-230
               

               Cow position:
               chr11:7013567-7013793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 184
               

               Conread position:
               6-230
               

               Cow position:
               chr11:8544855-8545069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               213, 48
               

               Conread position:
               6-230
               

               Cow position:
               chr11:31875255-31875040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               6-231
               

               Cow position:
               chr11:3283202-3282977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               53, 164
               

               Conread position:
               6-231
               

               Cow position:
               chr11:5217299-5217523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               176, 49
               

               Conread position:
               6-231
               

               Cow position:
               chr11:35347590-35347808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               6-231
               

               Cow position:
               chr11:40792531-40792763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               6-231
               

               Cow position:
               chr11:64009887-64009663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 62
               

               Conread position:
               6-231
               

               Cow position:
               chr11:78380908-78381116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               196, 48
               

               Conread position:
               6-232
               

               Cow position:
               chr11:6202617-6202388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 208
               

               Conread position:
               6-232
               

               Cow position:
               chr11:77745088-77745308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               6-234
               

               Cow position:
               chr11:19247044-19247255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               198, 16
               

               Conread position:
               6-234
               

               Cow position:
               chr11:29699526-29699757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 112
               

               Conread position:
               6-234
               

               Cow position:
               chr11:42016477-42016691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               218, 48
               

               Conread position:
               6-234
               

               Cow position:
               chr11:42291679-42291893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-234
               

               Cow position:
               chr11:43430275-43430515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               6-234
               

               Cow position:
               chr11:46746797-46746576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               138, 32
               

               Conread position:
               6-234
               

               Cow position:
               chr11:47310823-47311043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               201, 48
               

               Conread position:
               6-234
               

               Cow position:
               chr11:50472479-50472258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               213, 57
               

               Conread position:
               6-234
               

               Cow position:
               chr11:61454342-61454571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               6-235
               

               Cow position:
               chr11:14875607-14875836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               170, 44
               

               Conread position:
               6-242
               

               Cow position:
               chr11:56676086-56675850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 48
               

               Conread position:
               7-138
               

               Cow position:
               chr11:26823272-26823148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-138
               

               Cow position:
               chr11:35922036-35922159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-161
               

               Cow position:
               chr11:76896213-76896359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-173
               

               Cow position:
               chr11:4363753-4363908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-175
               

               Cow position:
               chr11:70600667-70600827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               7-179
               

               Cow position:
               chr11:6319971-6320135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-180
               

               Cow position:
               chr11:35924222-35924057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 31
               

               Conread position:
               7-181
               

               Cow position:
               chr11:2836020-2835854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               7-181
               

               Cow position:
               chr11:63498971-63499131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               7-186
               

               Cow position:
               chr11:64781248-64781077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               7-188
               

               Cow position:
               chr11:6094244-6094414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               7-188
               

               Cow position:
               chr11:47412002-47411830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-195
               

               Cow position:
               chr11:25968693-25968869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-196
               

               Cow position:
               chr11:60486256-60486438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               7-200
               

               Cow position:
               chr11:48776153-48776340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 47
               

               Conread position:
               7-202
               

               Cow position:
               chr11:46884535-46884348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-202
               

               Cow position:
               chr11:68660453-68660636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               7-206
               

               Cow position:
               chr11:64409126-64408946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               195, 57
               

               Conread position:
               7-209
               

               Cow position:
               chr11:14649151-14649347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               7-210
               

               Cow position:
               chr11:63975291-63975095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-210
               

               Cow position:
               chr11:70458204-70458007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               143, 47
               

               Conread position:
               7-210
               

               Cow position:
               chr11:78544445-78544249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               195, 43
               

               Conread position:
               7-212
               

               Cow position:
               chr11:34616421-34616222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               148, 47
               

               Conread position:
               7-212
               

               Cow position:
               chr11:48672874-48672678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-215
               

               Cow position:
               chr11:71111058-71110853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               7-221
               

               Cow position:
               chr11:27343432-27343227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               193, 47
               

               Conread position:
               7-221
               

               Cow position:
               chr11:29308742-29308535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-222
               

               Cow position:
               chr11:6642974-6642768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               195, 46
               

               Conread position:
               7-223
               

               Cow position:
               chr11:1067278-1067485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               195, 56
               

               Conread position:
               7-223
               

               Cow position:
               chr11:2788555-2788347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-223
               

               Cow position:
               chr11:8670177-8669964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               7-223
               

               Cow position:
               chr11:36977967-36977760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               195, 54
               

               Conread position:
               7-223
               

               Cow position:
               chr11:71854124-71854324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-224
               

               Cow position:
               chr11:11994552-11994753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-224
               

               Cow position:
               chr11:20194264-20194473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               195, 54
               

               Conread position:
               7-224
               

               Cow position:
               chr11:21508171-21507956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 67
               

               Conread position:
               7-224
               

               Cow position:
               chr11:30370262-30370063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-224
               

               Cow position:
               chr11:35791660-35791869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               194, 43
               

               Conread position:
               7-224
               

               Cow position:
               chr11:36217540-36217745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               195, 54
               

               Conread position:
               7-224
               

               Cow position:
               chr11:36940434-36940643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-224
               

               Cow position:
               chr11:41438025-41438233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               187, 47
               

               Conread position:
               7-224
               

               Cow position:
               chr11:43524770-43524561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-224
               

               Cow position:
               chr11:45700651-45700443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               194, 43
               

               Conread position:
               7-224
               

               Cow position:
               chr11:55636065-55636273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               195, 43
               

               Conread position:
               7-224
               

               Cow position:
               chr11:66325947-66326157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               195, 46
               

               Conread position:
               7-224
               

               Cow position:
               chr11:81300461-81300668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-225
               

               Cow position:
               chr11:54741925-54742128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-226
               

               Cow position:
               chr11:35444205-35443996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-231
               

               Cow position:
               chr11:40794191-40794407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-231
               

               Cow position:
               chr11:55398991-55399208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               178, 47
               

               Conread position:
               7-232
               

               Cow position:
               chr11:16315034-16314818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               195, 54
               

               Conread position:
               7-233
               

               Cow position:
               chr11:5075070-5075288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-233
               

               Cow position:
               chr11:55744629-55744412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               193, 54
               

               Conread position:
               7-233
               

               Cow position:
               chr11:76653181-76652963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-234
               

               Cow position:
               chr11:6245481-6245263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               195, 65
               

               Conread position:
               7-234
               

               Cow position:
               chr11:20684410-20684629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               188, 54
               

               Conread position:
               7-234
               

               Cow position:
               chr11:30721260-30721042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               195, 67
               

               Conread position:
               7-234
               

               Cow position:
               chr11:31024641-31024864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               195, 71
               

               Conread position:
               7-234
               

               Cow position:
               chr11:36914405-36914624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               195, 47
               

               Conread position:
               7-234
               

               Cow position:
               chr11:37804392-37804611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-234
               

               Cow position:
               chr11:45872150-45872367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               7-234
               

               Cow position:
               chr11:57724663-57724882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               192, 43
               

               Conread position:
               7-236
               

               Cow position:
               chr11:3908454-3908677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               195, 43
               

               Conread position:
               7-248
               

               Cow position:
               chr11:35805820-35805583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 47
               

               Conread position:
               8-166
               

               Cow position:
               chr11:20021990-20021830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               8-192
               

               Cow position:
               chr11:37100013-37100184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-193
               

               Cow position:
               chr11:12555145-12555322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               8-208
               

               Cow position:
               chr11:18508870-18509062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-210
               

               Cow position:
               chr11:35562880-35562685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               194, 46
               

               Conread position:
               8-210
               

               Cow position:
               chr11:35665404-35665597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               194, 46
               

               Conread position:
               8-225
               

               Cow position:
               chr11:62754139-62754366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 210
               

               Conread position:
               8-231
               

               Cow position:
               chr11:4652788-4653025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 224
               

               Conread position:
               9-158
               

               Cow position:
               chr11:7651907-7652048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               9-178
               

               Cow position:
               chr11:21173279-21173439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               9-192
               

               Cow position:
               chr11:15366820-15366988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               9-202
               

               Cow position:
               chr11:45350352-45350537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               9-223
               

               Cow position:
               chr11:32436503-32436288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               9-227
               

               Cow position:
               chr11:46999144-46998931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               180, 69
               

               Conread position:
               9-229
               

               Cow position:
               chr11:59862368-59862155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               195, 45
               

               Conread position:
               10-190
               

               Cow position:
               chr11:20117232-20117060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 53
               

               Conread position:
               11-193
               

               Cow position:
               chr11:18791907-18792084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               131, 53
               

               Conread position:
               11-223
               

               Cow position:
               chr11:87155677-87155475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               12-173
               

               Cow position:
               chr11:34778287-34778440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               12-178
               

               Cow position:
               chr11:6594074-6594241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               12-192
               

               Cow position:
               chr11:35140065-35139892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               166, 42
               

               Conread position:
               12-193
               

               Cow position:
               chr11:75246320-75246143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               12-197
               

               Cow position:
               chr11:46245704-46245885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               12-206
               

               Cow position:
               chr11:65495189-65495366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               12-223
               

               Cow position:
               chr11:34896718-34896515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               190, 42
               

               Conread position:
               12-224
               

               Cow position:
               chr11:62230343-62230134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               192, 63
               

               Conread position:
               12-224
               

               Cow position:
               chr11:83357551-83357348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               190, 38
               

               Conread position:
               12-225
               

               Cow position:
               chr11:3714977-3714778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               12-232
               

               Cow position:
               chr11:69168743-69168527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               148, 62
               

               Conread position:
               13-227
               

               Cow position:
               chr11:27913440-27913235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               13-230
               

               Cow position:
               chr11:32398795-32398586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               13-231
               

               Cow position:
               chr11:21893995-21894215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               67, 141
               

               Conread position:
               13-234
               

               Cow position:
               chr11:55334073-55333852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               14-155
               

               Cow position:
               chr11:62606571-62606438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-158
               

               Cow position:
               chr11:55117599-55117463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               14-162
               

               Cow position:
               chr11:36300428-36300567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-174
               

               Cow position:
               chr11:42067224-42067056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-175
               

               Cow position:
               chr11:44620109-44619956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               14-181
               

               Cow position:
               chr11:1076560-1076388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               14-181
               

               Cow position:
               chr11:33368227-33368078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-182
               

               Cow position:
               chr11:76248202-76248044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-197
               

               Cow position:
               chr11:17517555-17517378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               14-198
               

               Cow position:
               chr11:41980048-41980224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               14-200
               

               Cow position:
               chr11:19739241-19739419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-200
               

               Cow position:
               chr11:67312941-67312757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               14-212
               

               Cow position:
               chr11:31413613-31413418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               161, 54
               

               Conread position:
               14-218
               

               Cow position:
               chr11:34136394-34136202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               14-224
               

               Cow position:
               chr11:84385484-84385683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-225
               

               Cow position:
               chr11:32777827-32777630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               190, 40
               

               Conread position:
               14-226
               

               Cow position:
               chr11:19591840-19592043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               188, 40
               

               Conread position:
               14-227
               

               Cow position:
               chr11:65826598-65826803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               184, 34
               

               Conread position:
               14-229
               

               Cow position:
               chr11:84775247-84775019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               14-231
               

               Cow position:
               chr11:26632859-26633065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-231
               

               Cow position:
               chr11:76890200-76889991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               190, 40
               

               Conread position:
               14-232
               

               Cow position:
               chr11:37435834-37436040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               15-145
               

               Cow position:
               chr11:38879438-38879306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               15-191
               

               Cow position:
               chr11:17807809-17807978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               165, 44
               

               Conread position:
               15-222
               

               Cow position:
               chr11:26143942-26144143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               16-210
               

               Cow position:
               chr11:75090066-75090253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               186, 38
               

               Conread position:
               16-214
               

               Cow position:
               chr11:53717638-53717844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               16-221
               

               Cow position:
               chr11:30808441-30808638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               16-224
               

               Cow position:
               chr11:30209670-30209867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               186, 38
               

               Conread position:
               16-231
               

               Cow position:
               chr11:46329652-46329438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               159, 38
               

               Conread position:
               16-234
               

               Cow position:
               chr11:19232799-19233009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               186, 38
               

               Conread position:
               17-219
               

               Cow position:
               chr11:40459260-40459065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               18-190
               

               Cow position:
               chr11:77758612-77758774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               18-224
               

               Cow position:
               chr11:84498794-84498996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 117
               

               Conread position:
               18-232
               

               Cow position:
               chr11:47837471-47837266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               19-187
               

               Cow position:
               chr11:19549627-19549474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               19-233
               

               Cow position:
               chr11:71868455-71868662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               185, 27
               

               Conread position:
               19-234
               

               Cow position:
               chr11:35926760-35926962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               204, 53
               

               Conread position:
               21-154
               

               Cow position:
               chr11:30597185-30597050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               21-181
               

               Cow position:
               chr11:29482286-29482440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               21-191
               

               Cow position:
               chr11:41983012-41983181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               21-197
               

               Cow position:
               chr11:30476150-30475972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               21-210
               

               Cow position:
               chr11:6395903-6395722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               21-219
               

               Cow position:
               chr11:63909509-63909706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 141
               

               Conread position:
               21-225
               

               Cow position:
               chr11:372559-372752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               21-225
               

               Cow position:
               chr11:36920428-36920626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               21-231
               

               Cow position:
               chr11:63917315-63917529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 112
               

               Conread position:
               21-231
               

               Cow position:
               chr11:67804891-67804696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               21-232
               

               Cow position:
               chr11:36112564-36112368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               203, 42
               

               Conread position:
               23-178
               

               Cow position:
               chr11:37982425-37982579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               23-233
               

               Cow position:
               chr11:27765307-27765098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               27-180
               

               Cow position:
               chr11:30507694-30507541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               33-232
               

               Cow position:
               chr11:42043855-42044046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               41-224
               

               Cow position:
               chr11:34963205-34963019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               158, 114
               

               Conread position:
               43-200
               

               Cow position:
               chr11:30404701-30404540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               43-221
               

               Cow position:
               chr11:21852165-21852345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               47-179
               

               Cow position:
               chr11:84757962-84757830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 119
               

               Conread position:
               47-230
               

               Cow position:
               chr11:40478722-40478907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               47-232
               

               Cow position:
               chr11:63919920-63920108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 173
               

               Conread position:
               47-234
               

               Cow position:
               chr11:33414366-33414180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               155, 166
               

               Conread position:
               49-223
               

               Cow position:
               chr11:33311107-33310928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 173
               

               Conread position:
               50-163
               

               Cow position:
               chr11:34623297-34623184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               50-189
               

               Cow position:
               chr11:48232953-48232815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               50-198
               

               Cow position:
               chr11:5789773-5789921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               50-218
               

               Cow position:
               chr11:77128789-77128619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               50-220
               

               Cow position:
               chr11:9270598-9270768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               50-223
               

               Cow position:
               chr11:36658696-36658864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               50-224
               

               Cow position:
               chr11:66518612-66518445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               50-225
               

               Cow position:
               chr11:64867895-64868070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               130, 32
               

               Conread position:
               50-225
               

               Cow position:
               chr11:83579052-83579221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               50-227
               

               Cow position:
               chr11:70826075-70825897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               50-232
               

               Cow position:
               chr11:36238903-36238725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               50-232
               

               Cow position:
               chr11:36849046-36848871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 130
               

               Conread position:
               50-234
               

               Cow position:
               chr11:34032072-34032257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 105
               

               Conread position:
               50-250
               

               Cow position:
               chr11:56290638-56290439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               52-158
               

               Cow position:
               chr11:75246472-75246367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               52-230
               

               Cow position:
               chr11:68173658-68173479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               54-218
               

               Cow position:
               chr11:54334451-54334287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-231
               

               Cow position:
               chr11:30879790-30879622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               55-175
               

               Cow position:
               chr11:35860702-35860584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               55-191
               

               Cow position:
               chr11:65842953-65843088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               55-222
               

               Cow position:
               chr11:28644209-28644043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               95, 99
               

               Conread position:
               55-223
               

               Cow position:
               chr11:35573370-35573536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               147, 106
               

               Conread position:
               55-224
               

               Cow position:
               chr11:22747208-22747374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 108
               

               Conread position:
               55-224
               

               Cow position:
               chr11:83033118-83033282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               55-225
               

               Cow position:
               chr11:41175827-41175997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               55-231
               

               Cow position:
               chr11:40573214-40573389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               162, 89
               

               Conread position:
               56-158
               

               Cow position:
               chr11:78780738-78780840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-178
               

               Cow position:
               chr11:81614395-81614515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               56-216
               

               Cow position:
               chr11:18608120-18608277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               56-224
               

               Cow position:
               chr11:30888159-30888329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               56-224
               

               Cow position:
               chr11:61958622-61958790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               57-187
               

               Cow position:
               chr11:32615852-32615725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               57-207
               

               Cow position:
               chr11:2344370-2344219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               57-233
               

               Cow position:
               chr11:72333710-72333533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               58-222
               

               Cow position:
               chr11:64351672-64351836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               58-224
               

               Cow position:
               chr11:7560118-7559953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               144, 152
               

               Conread position:
               58-225
               

               Cow position:
               chr11:7924475-7924636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               58-234
               

               Cow position:
               chr11:38236370-38236192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               59-224
               

               Cow position:
               chr11:83926158-83926003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               59-232
               

               Cow position:
               chr11:80530474-80530310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               158, 22
               

               Conread position:
               60-227
               

               Cow position:
               chr11:33345562-33345396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               60-231
               

               Cow position:
               chr11:33527169-33526996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               60-234
               

               Cow position:
               chr11:7590303-7590136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               61-189
               

               Cow position:
               chr11:31901302-31901173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               64-175
               

               Cow position:
               chr11:61178470-61178359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-195
               

               Cow position:
               chr11:71767716-71767583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               64-215
               

               Cow position:
               chr11:62778554-62778406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               64-222
               

               Cow position:
               chr11:69119405-69119249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               140, 11
               

               Conread position:
               64-223
               

               Cow position:
               chr11:35669840-35669998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               64-229
               

               Cow position:
               chr11:35536699-35536532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               156, 89
               

               Conread position:
               64-234
               

               Cow position:
               chr11:70086445-70086278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               136, 69
               

               Conread position:
               65-186
               

               Cow position:
               chr11:37923382-37923262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               65-192
               

               Cow position:
               chr11:44032123-44031996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               65-193
               

               Cow position:
               chr11:18189625-18189752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               65-210
               

               Cow position:
               chr11:69415487-69415630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               66-224
               

               Cow position:
               chr11:17227534-17227689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               66-231
               

               Cow position:
               chr11:71341354-71341522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               67-193
               

               Cow position:
               chr11:81728539-81728665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-218
               

               Cow position:
               chr11:897783-897632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               16, 143
               

               Conread position:
               68-233
               

               Cow position:
               chr11:39118864-39118695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               68-234
               

               Cow position:
               chr11:31410769-31410936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               126, 142
               

               Conread position:
               72-186
               

               Cow position:
               chr11:46452240-46452126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-194
               

               Cow position:
               chr11:3769204-3769326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-200
               

               Cow position:
               chr11:17559236-17559107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               72-230
               

               Cow position:
               chr11:49153055-49152896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               72-232
               

               Cow position:
               chr11:8988127-8988285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               73-178
               

               Cow position:
               chr11:65858186-65858081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-219
               

               Cow position:
               chr11:45849394-45849542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               75, 139
               

               Conread position:
               73-223
               

               Cow position:
               chr11:2933250-2933097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 139
               

               Conread position:
               73-224
               

               Cow position:
               chr11:36799204-36799356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               73-224
               

               Cow position:
               chr11:61137071-61137221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               127, 137
               

               Conread position:
               73-231
               

               Cow position:
               chr11:63482325-63482482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               73-232
               

               Cow position:
               chr11:27565436-27565277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 65
               

               Conread position:
               74-233
               

               Cow position:
               chr11:1362365-1362523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               76-184
               

               Cow position:
               chr11:1955789-1955896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               76-185
               

               Cow position:
               chr11:5176276-5176388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               76-191
               

               Cow position:
               chr11:86895477-86895362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-228
               

               Cow position:
               chr11:77556197-77556046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               128, 134
               

               Conread position:
               76-235
               

               Cow position:
               chr11:30925255-30925099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               77-191
               

               Cow position:
               chr11:47585963-47586073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               77-191
               

               Cow position:
               chr11:62808407-62808520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               77-191
               

               Cow position:
               chr11:63517208-63517097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               77-200
               

               Cow position:
               chr11:40860460-40860582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               77-222
               

               Cow position:
               chr11:76114742-76114600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               140, 46
               

               Conread position:
               77-223
               

               Cow position:
               chr11:19946529-19946389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               77-224
               

               Cow position:
               chr11:3234175-3234029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               77-224
               

               Cow position:
               chr11:62155738-62155591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-224
               

               Cow position:
               chr11:66041378-66041237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 100
               

               Conread position:
               77-226
               

               Cow position:
               chr11:17278576-17278720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               77-226
               

               Cow position:
               chr11:71492762-71492908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               77-227
               

               Cow position:
               chr11:15373939-15373787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               77-227
               

               Cow position:
               chr11:81931017-81931163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               77-230
               

               Cow position:
               chr11:30787323-30787168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               77-232
               

               Cow position:
               chr11:22977775-22977929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               77-234
               

               Cow position:
               chr11:42359219-42359057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               77-234
               

               Cow position:
               chr11:51729386-51729230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               78-190
               

               Cow position:
               chr11:37335991-37336102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               78-197
               

               Cow position:
               chr11:15682881-15683000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-200
               

               Cow position:
               chr11:63382092-63382214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-213
               

               Cow position:
               chr11:17768582-17768449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               119, 99
               

               Conread position:
               78-219
               

               Cow position:
               chr11:29946814-29946956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               78-223
               

               Cow position:
               chr11:80761279-80761426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               78-231
               

               Cow position:
               chr11:30638851-30639004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-207
               

               Cow position:
               chr11:16719343-16719214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               79-224
               

               Cow position:
               chr11:67912054-67912199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 68
               

               Conread position:
               79-231
               

               Cow position:
               chr11:34113363-34113207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               81-223
               

               Cow position:
               chr11:29983622-29983762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               81-223
               

               Cow position:
               chr11:76835528-76835670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               81-225
               

               Cow position:
               chr11:44636658-44636802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 136
               

               Conread position:
               82-184
               

               Cow position:
               chr11:80586369-80586267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-223
               

               Cow position:
               chr11:21910532-21910675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               82-223
               

               Cow position:
               chr11:84977263-84977406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               82-224
               

               Cow position:
               chr11:84890623-84890765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               121, 53
               

               Conread position:
               82-225
               

               Cow position:
               chr11:18587501-18587643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               82-225
               

               Cow position:
               chr11:41313562-41313704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               121, 127
               

               Conread position:
               82-227
               

               Cow position:
               chr11:7307728-7307582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               82-230
               

               Cow position:
               chr11:56734723-56734578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               122, 7
               

               Conread position:
               82-231
               

               Cow position:
               chr11:23232425-23232571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 51
               

               Conread position:
               82-231
               

               Cow position:
               chr11:64048498-64048349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               118, 125
               

               Conread position:
               82-231
               

               Cow position:
               chr11:65607594-65607747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 128
               

               Conread position:
               82-231
               

               Cow position:
               chr11:76606767-76606620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               82-232
               

               Cow position:
               chr11:377547-377702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               82-233
               

               Cow position:
               chr11:1157738-1157586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               122, 79
               

               Conread position:
               83-214
               

               Cow position:
               chr11:73353966-73354097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-231
               

               Cow position:
               chr11:41809399-41809546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               83-232
               

               Cow position:
               chr11:42083562-42083419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               84-216
               

               Cow position:
               chr11:61130574-61130704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               84-225
               

               Cow position:
               chr11:13500108-13499970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               85-231
               

               Cow position:
               chr11:36987041-36986899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               87-224
               

               Cow position:
               chr11:49934641-49934777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               88-234
               

               Cow position:
               chr11:64638437-64638581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               89-227
               

               Cow position:
               chr11:21438296-21438155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               114, 120
               

               Conread position:
               89-229
               

               Cow position:
               chr11:77546503-77546362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               89-231
               

               Cow position:
               chr11:48306259-48306403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 64
               

               Conread position:
               89-233
               

               Cow position:
               chr11:48512251-48512109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               91-223
               

               Cow position:
               chr11:18317132-18317263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 34
               

               Conread position:
               91-224
               

               Cow position:
               chr11:34106584-34106716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               95-225
               

               Cow position:
               chr11:52983757-52983628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               101-215
               

               Cow position:
               chr11:71482455-71482341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-135
Cow position:	chr11:23278987-23279116 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	105
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	51, 0
Conread position:	1-138
Cow position:	chr11:38657016-38657145 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	109
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	63, 0
Conread position:	1-140
Cow position:	chr11:39271207-39271349 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	107
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	55, 0
Conread position:	1-142
Cow position:	chr11:2864189-2864038 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	116
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	51, 0
Conread position:	1-143
Cow position:	chr11:8828176-8828039 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	111
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	53, 0
Conread position:	1-144
Cow position:	chr11:24551557-24551423 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	114
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	97, 66
Conread position:	1-147
Cow position:	chr11:33271595-33271460 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	116
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	63, 0
Conread position:	1-148
Cow position:	chr11:44016411-44016272 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	120
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	59, 0
Conread position:	1-154
Cow position:	chr11:44176759-44176618 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	121
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	25, 0
Conread position:	1-155
Cow position:	chr11:43641554-43641408 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	117
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	53, 0
Conread position:	1-156
Cow position:	chr11:33369318-33369171 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	124
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	53, 0
Conread position:	1-157
Cow position:	chr11:69421539-69421693 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	117
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	82, 71
Conread position:	1-158
Cow position:	chr11:26057481-26057632 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	121
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	53, 0
Conread position:	1-163
Cow position:	chr11:11483487-11483324 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	126
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	77, 63
Conread position:	1-166
Cow position:	chr11:68570215-68570370 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	124
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	33, 0
Conread position:	1-168
Cow position:	chr11:13843639-13843456 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	135
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	50, 0
Conread position:	1-172
Cow position:	chr11:26442337-26442500 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	129
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	51, 0
Conread position:	1-176
Cow position:	chr11:38983-38813 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	126
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	145, 53
Conread position:	1-177
Cow position:	chr11:25376678-25376500 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	131
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	61, 145
Conread position:	1-178
Cow position:	chr11:30322328-30322494 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	138
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	36, 0