Cow genome map

Conread name: Pla1-C0000935_D19

Conread position: 1-132
Cow position: chrX:39887001-39887125 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-135
Cow position: chrX:1996240-1996366 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-136
Cow position: chrX:19510897-19511032 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 16

Conread position: 1-142
Cow position: chrX:37717933-37717801 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-146
Cow position: chrX:3543076-3542931 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-147
Cow position: chrX:42506735-42506875 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-155
Cow position: chrX:34193869-34194015 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-156
Cow position: chrX:23182756-23182918 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-157
Cow position: chrX:4592275-4592438 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-157
Cow position: chrX:9451552-9451409 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 1-158
Cow position: chrX:11589156-11589304 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 1-158
Cow position: chrX:41062446-41062292 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-162
Cow position: chrX:47063057-47063220 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 1-166
Cow position: chrX:36039626-36039454 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1-173
Cow position: chrX:47100383-47100549 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 1-177
Cow position: chrX:41990912-41991090 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 1-177
Cow position: chrX:44225519-44225687 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-178
Cow position: chrX:42760464-42760295 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-178
Cow position: chrX:46068552-46068716 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 1-180
Cow position: chrX:23485741-23485563 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 176, 0

Conread position: 1-181
Cow position: chrX:35409963-35409792 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 1-183
Cow position: chrX:41435331-41435511 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-183
Cow position: chrX:44123460-44123293 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 1-185
Cow position: chrX:876636-876806 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 1-185
Cow position: chrX:29451334-29451514 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 53

Conread position: 1-185
Cow position: chrX:40451857-40452048 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 101

Conread position: 1-186
Cow position: chrX:10279086-10278899 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 161, 14

Conread position: 1-186
Cow position: chrX:27270580-27270410 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 21

Conread position: 1-187
Cow position: chrX:35681778-35681602 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-188
Cow position: chrX:17498534-17498355 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position: chrX:8327116-8326936 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position: chrX:48822131-48822310 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 1-192
Cow position: chrX:11781458-11781282 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 1-194
Cow position: chrX:44995711-44995525 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 143, 53

Conread position: 1-195
Cow position: chrX:27442327-27442512 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 1-196
Cow position: chrX:31983367-31983560 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 180, 70

Conread position: 1-197
Cow position: chrX:51691-51872 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-197
Cow position: chrX:8642256-8642070 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-197
Cow position: chrX:8759834-8759648 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 105, 53

Conread position: 1-197
Cow position: chrX:16763719-16763903 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 179, 53

Conread position: 1-200
Cow position: chrX:19356675-19356490 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 167, 53

Conread position: 1-200
Cow position: chrX:34554935-34554744 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-200
Cow position: chrX:43011932-43012127 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 109

Conread position: 1-213
Cow position: chrX:4559945-4559747 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-213
Cow position: chrX:16323804-16324006 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 201, 77

Conread position: 1-213
Cow position: chrX:27447928-27447708 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 159, 73

Conread position: 1-215
Cow position: chrX:24170514-24170723 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 1-215
Cow position: chrX:42449802-42450008 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 1-215
Cow position: chrX:44055014-44054808 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 1-216
Cow position: chrX:27705798-27705592 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 31

Conread position: 1-216
Cow position: chrX:35285385-35285178 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 0

Conread position: 1-216
Cow position: chrX:38302025-38301814 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 72, 0

Conread position: 1-218
Cow position: chrX:17524172-17524381 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-219
Cow position: chrX:41270756-41270985 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 1-220
Cow position: chrX:19018617-19018830 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 1-220
Cow position: chrX:38968106-38967889 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 191, 63

Conread position: 1-221
Cow position: chrX:30840752-30840540 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 176, 53

Conread position: 1-221
Cow position: chrX:36283551-36283339 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 187, 53

Conread position: 1-221
Cow position: chrX:36356315-36356113 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 1-222
Cow position: chrX:4632643-4632860 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 53

Conread position: 1-222
Cow position: chrX:10516465-10516251 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 216, 53

Conread position: 1-222
Cow position: chrX:33654632-33654845 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-223
Cow position: chrX:34420947-34420733 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 53

Conread position: 1-223
Cow position: chrX:42246970-42247184 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-223
Cow position: chrX:46588031-46587821 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 200, 44

Conread position: 1-224
Cow position: chrX:4645703-4645915 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 1-224
Cow position: chrX:7648201-7648412 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 16, 61

Conread position: 1-224
Cow position: chrX:10831270-10831492 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 147, 53

Conread position: 1-224
Cow position: chrX:11653978-11653761 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 49

Conread position: 1-224
Cow position: chrX:12095560-12095776 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 53

Conread position: 1-224
Cow position: chrX:13122155-13121935 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 103, 53

Conread position: 1-224
Cow position: chrX:13868915-13868701 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 52

Conread position: 1-224
Cow position: chrX:23335764-23335974 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 203, 53

Conread position: 1-224
Cow position: chrX:28846681-28846895 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 54

Conread position: 1-224
Cow position: chrX:30672173-30672398 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 69

Conread position: 1-224
Cow position: chrX:35885521-35885730 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 194, 53

Conread position: 1-224
Cow position: chrX:38321172-38321386 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 199, 53

Conread position: 1-224
Cow position: chrX:38853422-38853196 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 159

Conread position: 1-224
Cow position: chrX:40680826-40680612 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-225
Cow position: chrX:1175779-1175985 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-225
Cow position: chrX:22115103-22115320 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 72

Conread position: 1-225
Cow position: chrX:27261401-27261187 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 12

Conread position: 1-225
Cow position: chrX:27668751-27668961 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 201, 30

Conread position: 1-225
Cow position: chrX:40035228-40035444 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 170, 50

Conread position: 1-226
Cow position: chrX:13924072-13923860 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-226
Cow position: chrX:44040388-44040177 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 196, 63

Conread position: 1-227
Cow position: chrX:27446894-27446680 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 1-227
Cow position: chrX:35382831-35383041 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 220, 48

Conread position: 1-228
Cow position: chrX:27508813-27509032 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 203, 60

Conread position: 1-228
Cow position: chrX:42380901-42381118 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-230
Cow position: chrX:6267881-6267663 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 106

Conread position: 1-230
Cow position: chrX:6407755-6407538 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 1-230
Cow position: chrX:9251952-9252171 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-230
Cow position: chrX:23562084-23561849 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 93

Conread position: 1-231
Cow position: chrX:5872543-5872307 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 221

Conread position: 1-231
Cow position: chrX:20339684-20339903 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 218, 15

Conread position: 1-231
Cow position: chrX:25035170-25035393 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 219, 53

Conread position: 1-231
Cow position: chrX:25037203-25036975 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 218, 71

Conread position: 1-231
Cow position: chrX:40337122-40336902 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-231
Cow position: chrX:44397222-44397006 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 36

Conread position: 1-232
Cow position: chrX:34441242-34441458 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 155, 34

Conread position: 1-232
Cow position: chrX:37489940-37489709 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 107

Conread position: 1-232
Cow position: chrX:42492310-42492531 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-232
Cow position: chrX:42836392-42836170 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 1-234
Cow position: chrX:4109396-4109175 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 226, 53

Conread position: 1-234
Cow position: chrX:6559245-6559461 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 203, 53

Conread position: 1-234
Cow position: chrX:25815688-25815915 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 53

Conread position: 1-234
Cow position: chrX:36866384-36866163 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 203, 53

Conread position: 1-234
Cow position: chrX:40269719-40269480 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 35

Conread position: 1-234
Cow position: chrX:40480637-40480883 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 107

Conread position: 1-234
Cow position: chrX:40531815-40532055 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 217

Conread position: 1-235
Cow position: chrX:2674746-2674970 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 156, 60

Conread position: 1-235
Cow position: chrX:11633893-11633668 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 231, 62

Conread position: 1-235
Cow position: chrX:24331988-24331763 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 223, 53

Conread position: 1-236
Cow position: chrX:38218924-38218701 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 53

Conread position: 1-238
Cow position: chrX:4268859-4269084 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 168, 52

Conread position: 1-243
Cow position: chrX:31436680-31436454 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 201, 44

Conread position: 3-166
Cow position: chrX:28107055-28106902 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 3-225
Cow position: chrX:13147189-13146977 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 4-227
Cow position: chrX:33204752-33204975 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 21

Conread position: 5-158
Cow position: chrX:22552772-22552916 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 5-224
Cow position: chrX:16409824-16409597 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 211

Conread position: 5-231
Cow position: chrX:21672770-21672544 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 7, 50

Conread position: 6-125
Cow position: chrX:42159148-42159037 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 6-155
Cow position: chrX:48574148-48574291 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 6-163
Cow position: chrX:11813280-11813130 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 48

Conread position: 6-171
Cow position: chrX:41363644-41363809 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-172
Cow position: chrX:10237707-10237864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 6-181
Cow position: chrX:13347475-13347313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 6-181
Cow position: chrX:14951147-14951313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 6-182
Cow position: chrX:40046363-40046536 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 154, 0

Conread position: 6-183
Cow position: chrX:6480389-6480558 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 6-190
Cow position: chrX:19795303-19795472 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 47

Conread position: 6-191
Cow position: chrX:27416301-27416122 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 176, 48

Conread position: 6-192
Cow position: chrX:34270767-34270592 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 6-192
Cow position: chrX:40649108-40648923 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 151, 66

Conread position: 6-197
Cow position: chrX:41790221-41790405 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 6-198
Cow position: chrX:24425795-24425979 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 6-199
Cow position: chrX:34398577-34398762 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 6-200
Cow position: chrX:28940450-28940263 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 57

Conread position: 6-200
Cow position: chrX:46532284-46532474 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 6-212
Cow position: chrX:10415046-10415248 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 179, 46

Conread position: 6-217
Cow position: chrX:22822261-22822050 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 198, 204

Conread position: 6-218
Cow position: chrX:28877960-28878171 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 57

Conread position: 6-221
Cow position: chrX:38654226-38654429 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 136, 0

Conread position: 6-222
Cow position: chrX:32420417-32420213 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 196, 57

Conread position: 6-223
Cow position: chrX:4403524-4403310 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 174, 47

Conread position: 6-223
Cow position: chrX:41027366-41027157 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 6-224
Cow position: chrX:8493273-8493063 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 197, 48

Conread position: 6-224
Cow position: chrX:21328120-21327909 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 174, 58

Conread position: 6-224
Cow position: chrX:29478928-29478722 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 6-224
Cow position: chrX:29601623-29601830 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 6-224
Cow position: chrX:31250596-31250384 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 16, 49

Conread position: 6-224
Cow position: chrX:31294363-31294575 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 6-224
Cow position: chrX:34412054-34411844 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 67

Conread position: 6-224
Cow position: chrX:42855669-42855457 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 6-225
Cow position: chrX:23513801-23514018 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 97

Conread position: 6-225
Cow position: chrX:32821246-32821026 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 112

Conread position: 6-225
Cow position: chrX:36391982-36392193 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 170, 48

Conread position: 6-226
Cow position: chrX:15231453-15231665 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 6-226
Cow position: chrX:21665030-21665246 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 217, 29

Conread position: 6-227
Cow position: chrX:45543541-45543314 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 6-229
Cow position: chrX:36367728-36367952 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 169, 55

Conread position: 6-230
Cow position: chrX:27511627-27511417 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 214, 45

Conread position: 6-231
Cow position: chrX:3580151-3579932 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 196, 55

Conread position: 6-231
Cow position: chrX:22284045-22283826 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 48

Conread position: 6-231
Cow position: chrX:38549652-38549436 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 174, 41

Conread position: 6-232
Cow position: chrX:26493213-26492994 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 196, 48

Conread position: 6-232
Cow position: chrX:40108307-40108532 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 49

Conread position: 6-233
Cow position: chrX:47279730-47279949 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 170, 48

Conread position: 6-234
Cow position: chrX:41941829-41941612 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 198, 39

Conread position: 6-234
Cow position: chrX:43150637-43150415 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 171, 57

Conread position: 6-235
Cow position: chrX:29723957-29723728 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 48

Conread position: 7-137
Cow position: chrX:8900224-8900086 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 7-140
Cow position: chrX:42314686-42314811 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 7-145
Cow position: chrX:11670892-11670762 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 7-158
Cow position: chrX:1938218-1938077 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 7-158
Cow position: chrX:5915396-5915251 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 57

Conread position: 7-158
Cow position: chrX:26881874-26882017 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 7-175
Cow position: chrX:37867638-37867477 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 47

Conread position: 7-180
Cow position: chrX:43014455-43014632 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 7-183
Cow position: chrX:37751906-37752068 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 7-184
Cow position: chrX:37867459-37867290 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 7-188
Cow position: chrX:25048897-25049067 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 7-188
Cow position: chrX:46533099-46533272 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 7-189
Cow position: chrX:14925478-14925308 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 7-189
Cow position: chrX:31986367-31986542 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 134, 47

Conread position: 7-192
Cow position: chrX:2314413-2314590 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 7-199
Cow position: chrX:24105045-24104861 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 7-200
Cow position: chrX:19761954-19761775 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 7-200
Cow position: chrX:20345656-20345474 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 7-200
Cow position: chrX:28068056-28067871 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 7-210
Cow position: chrX:24335871-24336067 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 195, 47

Conread position: 7-218
Cow position: chrX:4327978-4328180 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 197, 47

Conread position: 7-219
Cow position: chrX:30962670-30962876 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 91, 45

Conread position: 7-221
Cow position: chrX:43008815-43008609 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 195, 47

Conread position: 7-222
Cow position: chrX:8731299-8731093 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 195, 47

Conread position: 7-222
Cow position: chrX:32330376-32330168 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 47

Conread position: 7-223
Cow position: chrX:1397830-1397623 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 7-223
Cow position: chrX:16541451-16541658 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 7-223
Cow position: chrX:21064487-21064281 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 197, 47

Conread position: 7-223
Cow position: chrX:36109409-36109618 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 195, 58

Conread position: 7-223
Cow position: chrX:40574738-40574945 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 197, 47

Conread position: 7-223
Cow position: chrX:46770757-46770964 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 110, 47

Conread position: 7-224
Cow position: chrX:1553175-1552966 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 195, 47

Conread position: 7-224
Cow position: chrX:12290923-12290715 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 197, 57

Conread position: 7-224
Cow position: chrX:15546086-15545879 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 195, 13

Conread position: 7-224
Cow position: chrX:18111584-18111375 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 195, 47

Conread position: 7-224
Cow position: chrX:31829237-31829463 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 47, 219

Conread position: 7-224
Cow position: chrX:31948729-31948938 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 193, 47

Conread position: 7-224
Cow position: chrX:34540888-34540678 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 193, 56

Conread position: 7-224
Cow position: chrX:40320612-40320403 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 195, 47

Conread position: 7-224
Cow position: chrX:47484057-47484267 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 195, 47

Conread position: 7-224
Cow position: chrX:48474114-48473904 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 195, 44

Conread position: 7-225
Cow position: chrX:32910302-32910101 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 7-225
Cow position: chrX:35620910-35620699 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 195, 47

Conread position: 7-225
Cow position: chrX:44192237-44192452 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 48

Conread position: 7-226
Cow position: chrX:15597233-15597018 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 195, 43

Conread position: 7-226
Cow position: chrX:28632277-28632492 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 47

Conread position: 7-231
Cow position: chrX:21642276-21642493 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 195, 53

Conread position: 7-231
Cow position: chrX:27074846-27075060 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 195, 47

Conread position: 7-231
Cow position: chrX:31489726-31489506 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 197, 47

Conread position: 7-232
Cow position: chrX:4296619-4296835 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 188, 43

Conread position: 7-232
Cow position: chrX:17956894-17956682 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 7-232
Cow position: chrX:36976157-36975942 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 195, 47

Conread position: 7-233
Cow position: chrX:22813270-22813056 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 7-234
Cow position: chrX:17231942-17231722 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 47

Conread position: 7-234
Cow position: chrX:24365617-24365836 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 197, 44

Conread position: 7-234
Cow position: chrX:27175205-27174990 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 48

Conread position: 7-234
Cow position: chrX:44238557-44238777 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 195, 62

Conread position: 7-235
Cow position: chrX:11844035-11844259 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 195, 55

Conread position: 7-236
Cow position: chrX:26979586-26979803 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 12

Conread position: 7-236
Cow position: chrX:47344504-47344281 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 46

Conread position: 7-246
Cow position: chrX:21663500-21663270 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 8-159
Cow position: chrX:4444632-4444483 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 8-178
Cow position: chrX:5097589-5097756 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 132, 45

Conread position: 8-188
Cow position: chrX:597274-597441 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 8-197
Cow position: chrX:37062363-37062561 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 8-217
Cow position: chrX:3494617-3494819 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 194, 46

Conread position: 9-206
Cow position: chrX:27296294-27296513 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 9-215
Cow position: chrX:1122343-1122537 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 9-224
Cow position: chrX:46022978-46022770 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 193, 45

Conread position: 9-229
Cow position: chrX:12309182-12309393 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 10-225
Cow position: chrX:44339118-44339325 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 11-193
Cow position: chrX:46910011-46909843 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 11-206
Cow position: chrX:38094323-38094502 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 191, 43

Conread position: 11-221
Cow position: chrX:15146996-15147193 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 12-224
Cow position: chrX:11859336-11859539 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 192, 39

Conread position: 12-225
Cow position: chrX:5063438-5063248 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 192, 42

Conread position: 13-187
Cow position: chrX:1960226-1960391 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 13-223
Cow position: chrX:34222912-34222715 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 13-224
Cow position: chrX:38587643-38587845 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 13-225
Cow position: chrX:13382541-13382328 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 156

Conread position: 13-230
Cow position: chrX:34565484-34565275 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 190, 59

Conread position: 13-248
Cow position: chrX:24633893-24633657 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 138, 41

Conread position: 14-191
Cow position: chrX:4612673-4612852 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 82

Conread position: 14-192
Cow position: chrX:20583861-20583695 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 14-198
Cow position: chrX:6850424-6850232 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 14-199
Cow position: chrX:32877178-32877353 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 14-214
Cow position: chrX:19717712-19717529 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 146, 40

Conread position: 14-219
Cow position: chrX:18204265-18204465 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 146, 19

Conread position: 14-219
Cow position: chrX:35658995-35658802 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 14-221
Cow position: chrX:20677565-20677366 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 190, 40

Conread position: 14-221
Cow position: chrX:37956046-37955848 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 190, 40

Conread position: 14-224
Cow position: chrX:27393817-27394030 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 14-225
Cow position: chrX:21593490-21593284 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 40

Conread position: 14-230
Cow position: chrX:39220284-39220069 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 203, 71

Conread position: 14-231
Cow position: chrX:7351502-7351289 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 213, 57

Conread position: 14-231
Cow position: chrX:20168756-20168546 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 209, 45

Conread position: 14-232
Cow position: chrX:169343-169558 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 206, 58

Conread position: 14-234
Cow position: chrX:33466823-33466595 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 41

Conread position: 15-230
Cow position: chrX:36778614-36778400 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 17

Conread position: 15-232
Cow position: chrX:27460063-27459841 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 165, 53

Conread position: 15-233
Cow position: chrX:7337040-7336828 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 209, 47

Conread position: 16-189
Cow position: chrX:27667641-27667457 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 16-208
Cow position: chrX:31373751-31373548 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 16-212
Cow position: chrX:46032530-46032718 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 188, 53

Conread position: 16-224
Cow position: chrX:28837082-28836891 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 188, 38

Conread position: 16-230
Cow position: chrX:6690044-6690269 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 16-234
Cow position: chrX:28013242-28013460 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 164, 53

Conread position: 16-234
Cow position: chrX:45875588-45875379 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 188, 52

Conread position: 16-241
Cow position: chrX:26205258-26205467 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 188, 38

Conread position: 17-191
Cow position: chrX:4092120-4091954 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 17-231
Cow position: chrX:15820802-15820585 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 135

Conread position: 18-221
Cow position: chrX:39180039-39180233 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 18-224
Cow position: chrX:25412116-25411905 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 50, 94

Conread position: 18-225
Cow position: chrX:44961948-44961747 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 110, 44

Conread position: 20-225
Cow position: chrX:18964633-18964828 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 200, 56

Conread position: 21-163
Cow position: chrX:26692411-26692269 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-206
Cow position: chrX:753362-753166 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 21-209
Cow position: chrX:23098018-23098192 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 42

Conread position: 21-231
Cow position: chrX:29733391-29733603 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 68

Conread position: 21-231
Cow position: chrX:31252599-31252406 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 206, 33

Conread position: 21-232
Cow position: chrX:34503119-34502908 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 37

Conread position: 22-218
Cow position: chrX:28865814-28866000 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 180, 50

Conread position: 22-225
Cow position: chrX:18694728-18694930 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 97

Conread position: 22-225
Cow position: chrX:47046323-47046512 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 31-143
Cow position: chrX:42482646-42482757 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 31-177
Cow position: chrX:43143869-43143728 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 31-232
Cow position: chrX:18046589-18046390 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 97

Conread position: 37-191
Cow position: chrX:23860810-23860964 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 22

Conread position: 39-230
Cow position: chrX:6463782-6463603 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 123

Conread position: 41-232
Cow position: chrX:29680082-29680274 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 173, 39

Conread position: 41-249
Cow position: chrX:11717602-11717808 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 176

Conread position: 42-223
Cow position: chrX:42235346-42235524 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 43-232
Cow position: chrX:23562811-23562619 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 45-192
Cow position: chrX:11181020-11181167 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 19

Conread position: 47-223
Cow position: chrX:16575286-16575110 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 156, 163

Conread position: 48-234
Cow position: chrX:48558919-48558733 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 49-223
Cow position: chrX:6278324-6278499 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 28, 163

Conread position: 50-158
Cow position: chrX:23187424-23187530 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 50-170
Cow position: chrX:7107674-7107553 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 50-173
Cow position: chrX:2742170-2742293 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 48

Conread position: 50-198
Cow position: chrX:28098499-28098349 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 50-199
Cow position: chrX:15166235-15166088 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 38

Conread position: 50-207
Cow position: chrX:23266587-23266429 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 50-224
Cow position: chrX:31312200-31312027 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 149, 160

Conread position: 50-224
Cow position: chrX:37129440-37129267 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 166, 0

Conread position: 50-225
Cow position: chrX:20743776-20743601 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 167

Conread position: 50-231
Cow position: chrX:9365505-9365688 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 169, 0

Conread position: 50-232
Cow position: chrX:19097048-19097236 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 14

Conread position: 50-232
Cow position: chrX:37910613-37910435 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 36

Conread position: 50-232
Cow position: chrX:43730053-43730236 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 170, 135

Conread position: 53-225
Cow position: chrX:45099294-45099124 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 55-194
Cow position: chrX:11582387-11582250 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 55-220
Cow position: chrX:38226944-38227107 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 147, 59

Conread position: 55-223
Cow position: chrX:6259988-6260149 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 55-231
Cow position: chrX:23785814-23785636 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 82

Conread position: 56-192
Cow position: chrX:29562921-29563053 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 57-224
Cow position: chrX:23498516-23498680 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 59-231
Cow position: chrX:46433652-46433480 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 158, 17

Conread position: 62-226
Cow position: chrX:7179053-7178893 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 142, 59

Conread position: 64-191
Cow position: chrX:37749827-37749953 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 64-207
Cow position: chrX:35392141-35392281 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 98

Conread position: 64-213
Cow position: chrX:25459571-25459726 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 98

Conread position: 64-224
Cow position: chrX:9425595-9425745 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 81

Conread position: 64-224
Cow position: chrX:45968306-45968145 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 64-225
Cow position: chrX:17888266-17888422 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 64-232
Cow position: chrX:37836735-37836576 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 84

Conread position: 64-233
Cow position: chrX:7710381-7710551 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 64-234
Cow position: chrX:20697454-20697622 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 66-189
Cow position: chrX:36722651-36722773 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 68-222
Cow position: chrX:23092026-23091869 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 68-224
Cow position: chrX:46793595-46793749 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 134, 12

Conread position: 68-225
Cow position: chrX:27771815-27771968 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 76

Conread position: 68-225
Cow position: chrX:38964261-38964105 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 148, 0

Conread position: 68-231
Cow position: chrX:42873538-42873378 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 95

Conread position: 69-224
Cow position: chrX:11762850-11763006 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 148, 18

Conread position: 72-206
Cow position: chrX:47342264-47342130 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 96

Conread position: 72-230
Cow position: chrX:5900611-5900457 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 73-215
Cow position: chrX:1719263-1719121 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 73-215
Cow position: chrX:41810020-41810161 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 73-249
Cow position: chrX:11656229-11656053 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 137

Conread position: 74-223
Cow position: chrX:19943089-19943237 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 69

Conread position: 76-222
Cow position: chrX:29501739-29501881 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 39

Conread position: 76-224
Cow position: chrX:41878789-41878933 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 76-225
Cow position: chrX:6265453-6265600 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 87

Conread position: 76-231
Cow position: chrX:29289723-29289568 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 131, 126

Conread position: 77-177
Cow position: chrX:45934434-45934335 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 77-219
Cow position: chrX:38728878-38728739 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 77-222
Cow position: chrX:9416540-9416684 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 77-224
Cow position: chrX:15007006-15007151 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 77-224
Cow position: chrX:38722266-38722119 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 139

Conread position: 77-225
Cow position: chrX:32318450-32318301 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 77-230
Cow position: chrX:5679428-5679579 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 148, 84

Conread position: 77-230
Cow position: chrX:22914898-22915050 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 140, 52

Conread position: 77-231
Cow position: chrX:43779708-43779857 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 77-233
Cow position: chrX:9201692-9201536 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 132

Conread position: 77-234
Cow position: chrX:20584472-20584316 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 123, 133

Conread position: 78-224
Cow position: chrX:31442686-31442831 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 78-224
Cow position: chrX:31626835-31626976 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 78-225
Cow position: chrX:33640118-33639975 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 78-232
Cow position: chrX:23188641-23188791 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 84

Conread position: 78-232
Cow position: chrX:41238212-41238367 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 147, 84

Conread position: 79-232
Cow position: chrX:17966483-17966329 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 81-225
Cow position: chrX:24054817-24054666 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 81-231
Cow position: chrX:36514752-36514906 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 122

Conread position: 81-232
Cow position: chrX:11073051-11073206 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 126

Conread position: 82-215
Cow position: chrX:41068864-41068731 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 82-219
Cow position: chrX:46072678-46072815 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 125

Conread position: 82-224
Cow position: chrX:29553424-29553283 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 82-231
Cow position: chrX:41123198-41123050 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 137, 95

Conread position: 82-231
Cow position: chrX:45113760-45113607 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 82-233
Cow position: chrX:42894065-42893914 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 136

Conread position: 82-234
Cow position: chrX:10959256-10959405 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 0

Conread position: 82-234
Cow position: chrX:20678003-20678150 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 82-234
Cow position: chrX:46429680-46429830 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 83-191
Cow position: chrX:2551230-2551121 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 83-198
Cow position: chrX:18637630-18637512 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 83-224
Cow position: chrX:47514498-47514639 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 130

Conread position: 83-232
Cow position: chrX:11614831-11614686 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 137, 64

Conread position: 84-231
Cow position: chrX:10411847-10411998 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 84-234
Cow position: chrX:10305214-10305359 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 85-231
Cow position: chrX:917232-917377 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 87-224
Cow position: chrX:16830354-16830222 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 88-232
Cow position: chrX:7278044-7277900 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 137, 128

Conread position: 91-232
Cow position: chrX:19690345-19690204 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 109, 116

Conread position: 93-216
Cow position: chrX:37665819-37665696 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 94-223
Cow position: chrX:20881818-20881940 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 101-224
Cow position: chrX:35278449-35278325 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 118, 0

Show alignments to all cow chromosomes.