Cow genome map


           Conread name:
           Pla1-C0000936_E06
        

               Conread position:
               5-277
               

               Cow position:
               chr17:14325378-14325109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               34-262
               

               Cow position:
               chr17:36987531-36987306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               110-382
               

               Cow position:
               chr17:22557909-22558179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               110-409
               

               Cow position:
               chr17:18193503-18193801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 167
               

               Conread position:
               116-406
               

               Cow position:
               chr17:4081969-4082266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               120-404
               

               Cow position:
               chr17:42264832-42265123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               31, 145
               

               Conread position:
               132-410
               

               Cow position:
               chr17:18300469-18300185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               217, 0
               

               Conread position:
               136-410
               

               Cow position:
               chr17:19019509-19019782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               145, 31
               

               Conread position:
               137-378
               

               Cow position:
               chr17:20402017-20402263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               141-376
               

               Cow position:
               chr17:12670136-12669903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               159-409
               

               Cow position:
               chr17:3708831-3708567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               184-405
               

               Cow position:
               chr17:20487983-20488206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               95, 16
               
Show alignments to all cow chromosomes.