Cow genome map
| Conread name: | Pla1-C0000936_E06 |
| Conread position: | 1-410 |
| Cow position: | chr2:39622085-39622485 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 8-400 |
| Cow position: | chr2:28643345-28642966 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 9-404 |
| Cow position: | chr2:15577777-15577390 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 14-395 |
| Cow position: | chr2:16289019-16289400 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 89 |
| Conread position: | 30-163 |
| Cow position: | chr2:41149810-41149941 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 33-400 |
| Cow position: | chr2:14822318-14822676 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 35-197 |
| Cow position: | chr2:15062239-15062082 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 36-210 |
| Cow position: | chr2:36053832-36053661 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 36-339 |
| Cow position: | chr2:28621014-28620728 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 36-343 |
| Cow position: | chr2:1672852-1672563 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 36-362 |
| Cow position: | chr2:2356651-2356331 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 36-406 |
| Cow position: | chr2:34565110-34564744 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 35 |
| Conread position: | 49-361 |
| Cow position: | chr2:5485452-5485147 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 110-410 |
| Cow position: | chr2:11729439-11729732 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 110-410 |
| Cow position: | chr2:42333293-42332989 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 121-397 |
| Cow position: | chr2:3836616-3836337 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 161 |
| Conread position: | 128-377 |
| Cow position: | chr2:903433-903677 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 129-401 |
| Cow position: | chr2:782149-781880 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 157 |
| Conread position: | 136-389 |
| Cow position: | chr2:24393002-24392756 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 70 |
| Conread position: | 137-398 |
| Cow position: | chr2:1830196-1829937 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 139-379 |
| Cow position: | chr2:28747748-28747986 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 231, 139 |
| Conread position: | 184-383 |
| Cow position: | chr2:31295093-31295285 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 184, 95 |
| Conread position: | 188-360 |
| Cow position: | chr2:35355328-35355505 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 190-400 |
| Cow position: | chr2:41149943-41150150 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 169, 83 |
| Conread position: | 190-410 |
| Cow position: | chr2:1362805-1363025 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 125 |
| Conread position: | 191-406 |
| Cow position: | chr2:78741947-78742169 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 206-410 |
| Cow position: | chr2:36030681-36030473 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 222-374 |
| Cow position: | chr2:73192662-73192806 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 222-400 |
| Cow position: | chr2:7902700-7902874 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 158, 45 |
| Conread position: | 229-383 |
| Cow position: | chr2:15060852-15060698 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 105 |
Show alignments to all cow chromosomes.