Cow genome map
| Conread name: | Pla1-C0000936_E06 |
| Conread position: | 9-406 |
| Cow position: | chrX:6283021-6282621 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 10-181 |
| Cow position: | chrX:30142336-30142173 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 22-406 |
| Cow position: | chrX:2536722-2536329 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 36-216 |
| Cow position: | chrX:31725111-31725295 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 36-399 |
| Cow position: | chrX:21587278-21587647 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 110-368 |
| Cow position: | chrX:13417589-13417330 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 101 |
| Conread position: | 110-400 |
| Cow position: | chrX:22130441-22130131 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 210 |
| Conread position: | 110-400 |
| Cow position: | chrX:29758420-29758714 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 110-408 |
| Cow position: | chrX:17668058-17667770 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 110-410 |
| Cow position: | chrX:34991739-34992033 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 110-411 |
| Cow position: | chrX:24481226-24480923 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 175-395 |
| Cow position: | chrX:30140965-30140736 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 191-377 |
| Cow position: | chrX:18534402-18534587 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 209-405 |
| Cow position: | chrX:2143664-2143856 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 155, 38 |
| Conread position: | 214-411 |
| Cow position: | chrX:16016746-16016543 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 224-397 |
| Cow position: | chrX:30004108-30004280 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 159, 130 |
| Conread position: | 224-405 |
| Cow position: | chrX:31726053-31726237 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 224-410 |
| Cow position: | chrX:40246935-40246751 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 170, 55 |
| Conread position: | 226-410 |
| Cow position: | chrX:31081915-31082097 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 153, 53 |
| Conread position: | 258-410 |
| Cow position: | chrX:44387099-44387251 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 101, 77 |
Show alignments to all cow chromosomes.