Cow genome map

Conread name: Pla1-C0001062_A21

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-265
Cow position:
Alignm length: 265
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-267
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 197

Conread position: 1-268
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 177, 196

Conread position: 1-295
Cow position:
Alignm length: 296
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 204, 185

Conread position: 1-305
Cow position:
Alignm length: 306
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 287, 272

Conread position: 1-313
Cow position:
Alignm length: 314
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 207

Conread position: 1-320
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 187, 192

Conread position: 1-333
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 1-339
Cow position:
Alignm length: 339
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 322, 0

Conread position: 1-343
Cow position:
Alignm length: 344
Alignm identity: 221
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 285, 279

Conread position: 1-344
Cow position:
Alignm length: 345
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 200, 207

Conread position: 1-345
Cow position:
Alignm length: 347
Alignm identity: 233
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 32

Conread position: 1-348
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 339, 0

Conread position: 1-348
Cow position:
Alignm length: 349
Alignm identity: 228
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 345, 0

Conread position: 1-349
Cow position:
Alignm length: 352
Alignm identity: 218
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 26

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 223
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 192, 54

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 197

Conread position: 1-349
Cow position:
Alignm length: 351
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 304, 295

Conread position: 1-351
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 102

Conread position: 1-352
Cow position:
Alignm length: 352
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-359
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-364
Cow position:
Alignm length: 366
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 1-366
Cow position:
Alignm length: 366
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 0

Conread position: 1-366
Cow position:
Alignm length: 367
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 195

Conread position: 1-368
Cow position:
Alignm length: 369
Alignm identity: 239
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 345, 354

Conread position: 1-384
Cow position:
Alignm length: 389
Alignm identity: 251
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 71, 64

Conread position: 1-388
Cow position:
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 272

Conread position: 1-388
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 270

Conread position: 1-389
Cow position:
Alignm length: 391
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 112

Conread position: 1-390
Cow position:
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 110

Conread position: 1-391
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 352

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 267

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 355

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 20

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 271

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 355

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 185

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 115

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 397
Alignm identity: 261
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 84, 78

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 252
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 303, 297

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 152, 159

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 254
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 275, 264

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 275, 260

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 201, 206

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 38

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 250
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 289, 270

Conread position: 1-395
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 275, 267

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 190, 197

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 194

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 244
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 254
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 186, 80

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 261

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 183, 196

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 183, 196

Conread position: 3-216
Cow position:
Alignm length: 214
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-345
Cow position:
Alignm length: 345
Alignm identity: 212
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 117, 131

Conread position: 3-348
Cow position:
Alignm length: 347
Alignm identity: 229
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 337, 0

Conread position: 3-348
Cow position:
Alignm length: 346
Alignm identity: 217
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 339, 0

Conread position: 3-349
Cow position:
Alignm length: 347
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-394
Cow position:
Alignm length: 393
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 373, 360

Conread position: 3-394
Cow position:
Alignm length: 394
Alignm identity: 243
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 37

Conread position: 3-396
Cow position:
Alignm length: 395
Alignm identity: 251
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 303, 308

Conread position: 3-396
Cow position:
Alignm length: 396
Alignm identity: 248
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 123, 130

Conread position: 3-396
Cow position:
Alignm length: 395
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 283, 276

Conread position: 3-396
Cow position:
Alignm length: 394
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-353
Cow position:
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 4-394
Cow position:
Alignm length: 393
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 260

Conread position: 4-394
Cow position:
Alignm length: 393
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 355

Conread position: 4-396
Cow position:
Alignm length: 394
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 0

Conread position: 4-396
Cow position:
Alignm length: 396
Alignm identity: 249
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 8, 21

Conread position: 6-349
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-394
Cow position:
Alignm length: 391
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 181, 187

Conread position: 9-299
Cow position:
Alignm length: 292
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 196, 186

Conread position: 9-349
Cow position:
Alignm length: 342
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 280, 272

Conread position: 9-349
Cow position:
Alignm length: 342
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 23

Conread position: 9-351
Cow position:
Alignm length: 346
Alignm identity: 212
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 102

Conread position: 11-394
Cow position:
Alignm length: 387
Alignm identity: 254
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 82, 102

Conread position: 21-394
Cow position:
Alignm length: 376
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 265, 270

Conread position: 23-396
Cow position:
Alignm length: 375
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 233, 26

Conread position: 24-328
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 30-254
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 210

Conread position: 30-389
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 157

Conread position: 30-390
Cow position:
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-350
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-349
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-396
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 0

Conread position: 39-390
Cow position:
Alignm length: 352
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 39-394
Cow position:
Alignm length: 356
Alignm identity: 224
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 39-394
Cow position:
Alignm length: 356
Alignm identity: 219
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 39-396
Cow position:
Alignm length: 359
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 255, 265

Conread position: 47-394
Cow position:
Alignm length: 348
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 51-316
Cow position:
Alignm length: 266
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 51-388
Cow position:
Alignm length: 338
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 51-396
Cow position:
Alignm length: 347
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 323, 319

Conread position: 51-396
Cow position:
Alignm length: 346
Alignm identity: 220
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 51-396
Cow position:
Alignm length: 348
Alignm identity: 217
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 151, 157

Conread position: 51-396
Cow position:
Alignm length: 347
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 233, 223

Conread position: 60-394
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 141, 148

Conread position: 80-367
Cow position:
Alignm length: 288
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 81-396
Cow position:
Alignm length: 317
Alignm identity: 194
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 127

Conread position: 113-396
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 86

Conread position: 114-394
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 142, 162

Conread position: 114-394
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 161

Conread position: 122-394
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 72

Show alignments to all cow chromosomes.