Cow genome map

Conread name: Pla1-C0001062_A21

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 256, 262

Conread position: 1-273
Cow position:
Alignm length: 274
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 59

Conread position: 1-298
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 187, 191

Conread position: 1-317
Cow position:
Alignm length: 317
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-328
Cow position:
Alignm length: 329
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 253, 262

Conread position: 1-335
Cow position:
Alignm length: 335
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 229, 0

Conread position: 1-343
Cow position:
Alignm length: 346
Alignm identity: 221
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 100

Conread position: 1-343
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 1-343
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 263

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 0

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 1-350
Cow position:
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 0

Conread position: 1-350
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 128

Conread position: 1-351
Cow position:
Alignm length: 354
Alignm identity: 233
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 21

Conread position: 1-351
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-367
Cow position:
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-388
Cow position:
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 178

Conread position: 1-388
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 219

Conread position: 1-389
Cow position:
Alignm length: 389
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-389
Cow position:
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 178

Conread position: 1-390
Cow position:
Alignm length: 391
Alignm identity: 251
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 128, 100

Conread position: 1-390
Cow position:
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 362

Conread position: 1-390
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 362

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 95

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 257
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 203, 184

Conread position: 1-394
Cow position:
Alignm length: 397
Alignm identity: 262
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 23, 16

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 251
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 44, 26

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 293

Conread position: 1-394
Cow position:
Alignm length: 397
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 153, 141

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 271

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 254
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 254, 262

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 26

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 192

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 110

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 218

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 262

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 2-383
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-386
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 39

Conread position: 3-388
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-391
Cow position:
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-394
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-394
Cow position:
Alignm length: 393
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 266

Conread position: 3-396
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 275

Conread position: 3-396
Cow position:
Alignm length: 395
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 279

Conread position: 4-226
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 131

Conread position: 4-394
Cow position:
Alignm length: 393
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 218

Conread position: 4-394
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 111

Conread position: 4-394
Cow position:
Alignm length: 391
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-395
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 183

Conread position: 6-394
Cow position:
Alignm length: 389
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-394
Cow position:
Alignm length: 391
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 74

Conread position: 10-220
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 21-318
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 267, 248

Conread position: 24-394
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 255

Conread position: 28-368
Cow position:
Alignm length: 344
Alignm identity: 214
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 169

Conread position: 28-396
Cow position:
Alignm length: 369
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 29-394
Cow position:
Alignm length: 367
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 227, 235

Conread position: 30-336
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 277, 117

Conread position: 39-388
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 35

Conread position: 39-394
Cow position:
Alignm length: 357
Alignm identity: 229
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 314, 320

Conread position: 44-352
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 44-394
Cow position:
Alignm length: 351
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 53-349
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 6

Conread position: 74-390
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 289, 0

Conread position: 123-396
Cow position:
Alignm length: 274
Alignm identity: 179
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 192-394
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.