Cow genome map
| Conread name: | Pla1-C0001062_A21 |
| Conread position: | 1-348 |
| Cow position: | chr2:82799552-82799900 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 0 |
| Conread position: | 1-349 |
| Cow position: | chr2:5874820-5874471 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 187, 198 |
| Conread position: | 1-349 |
| Cow position: | chr2:5874988-5874639 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 1-349 |
| Cow position: | chr2:78754454-78754798 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-350 |
| Cow position: | chr2:86465292-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-351 |
| Cow position: | chr2:78755110-78755459 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 1-391 |
| Cow position: | chr2:82800056-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-391 |
| Cow position: | chr2:86465460-86465850 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 196, 185 |
| Conread position: | 1-394 |
| Cow position: | chr2:5874652-5874259 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 1-394 |
| Cow position: | chr2:78754204-78754595 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 279, 237 |
| Conread position: | 1-394 |
| Cow position: | chr2:78754858-78755251 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr2:78755194-78755585 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 1-394 |
| Cow position: | chr2:78755361-78755751 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 158 |
| Conread position: | 1-394 |
| Cow position: | chr2:82799468-82799861 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr2:82799804-82800197 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 262 |
| Conread position: | 1-394 |
| Cow position: | chr2:82799972-82800365 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-395 |
| Cow position: | chr2:78754942-78755336 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-396 |
| Cow position: | chr2:78754288-78754681 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 339, 154 |
| Conread position: | 1-396 |
| Cow position: | chr2:78755445-78755837 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 74 |
| Conread position: | 1-396 |
| Cow position: | chr2:82799636-82800031 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-396 |
| Cow position: | chr2:86465712-86466107 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 238, 222 |
| Conread position: | 2-225 |
| Cow position: | chr2:82800226-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 2-393 |
| Cow position: | chr2:78755947-78756337 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 167 |
| Conread position: | 2-394 |
| Cow position: | chr2:78754124-78754511 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-348 |
| Cow position: | chr2:5875070-5874724 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 108 |
| Conread position: | 5-343 |
| Cow position: | chr2:78754376-78754711 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 251, 66 |
| Conread position: | 5-396 |
| Cow position: | chr2:78754626-78755001 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-396 |
| Cow position: | chr2:86465128-86465519 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 125 |
| Conread position: | 38-394 |
| Cow position: | chr2:78754811-78755167 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-394 |
| Cow position: | chr2:82799938-82800281 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 288, 310 |
| Conread position: | 60-394 |
| Cow position: | chr2:48689540-48689207 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 115, 131 |
Show alignments to all cow chromosomes.