Cow genome map


           Conread name:
           Pla1-C0001062_A21
        

               Conread position:
               1-318
               

               Cow position:
               chr21:34222858-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               202, 196
               

               Conread position:
               1-348
               

               Cow position:
               chr21:34222942-34222594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               1-364
               

               Cow position:
               chr21:12608736-12608373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-368
               

               Cow position:
               chr21:12608904-12608538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               362, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr21:34223024-34222678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               127, 108
               

               Conread position:
               6-394
               

               Cow position:
               chr21:34223101-34222717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               208, 6
               

               Conread position:
               11-361
               

               Cow position:
               chr21:12659456-12659806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               12-348
               

               Cow position:
               chr21:12608305-12607968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               94, 88
               
Show alignments to all cow chromosomes.