Cow genome map

Conread name: Pla1-C0001062_A21

Conread position: 1-236
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 103, 113

Conread position: 1-292
Cow position:
Alignm length: 292
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-305
Cow position:
Alignm length: 305
Alignm identity: 189
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-313
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 191

Conread position: 1-313
Cow position:
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 291, 285

Conread position: 1-316
Cow position:
Alignm length: 319
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 26

Conread position: 1-317
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 29

Conread position: 1-321
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-321
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-329
Cow position:
Alignm length: 329
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-331
Cow position:
Alignm length: 335
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 29

Conread position: 1-339
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 186

Conread position: 1-343
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 281

Conread position: 1-343
Cow position:
Alignm length: 344
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 125

Conread position: 1-348
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 32, 24

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 0

Conread position: 1-349
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-349
Cow position:
Alignm length: 352
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 100

Conread position: 1-349
Cow position:
Alignm length: 351
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 41

Conread position: 1-350
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 256, 262

Conread position: 1-351
Cow position:
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 262

Conread position: 1-351
Cow position:
Alignm length: 353
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 213, 209

Conread position: 1-352
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 122, 111

Conread position: 1-352
Cow position:
Alignm length: 355
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 197, 183

Conread position: 1-355
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-361
Cow position:
Alignm length: 363
Alignm identity: 233
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 26

Conread position: 1-388
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 357

Conread position: 1-388
Cow position:
Alignm length: 389
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 352

Conread position: 1-388
Cow position:
Alignm length: 389
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 125

Conread position: 1-389
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-391
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 59

Conread position: 1-393
Cow position:
Alignm length: 395
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 105

Conread position: 1-393
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 23

Conread position: 1-394
Cow position:
Alignm length: 400
Alignm identity: 258
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 99, 112

Conread position: 1-394
Cow position:
Alignm length: 397
Alignm identity: 261
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 118, 110

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 219

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 358

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 198

Conread position: 1-394
Cow position:
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 25

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 101

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 193

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 361

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 56

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 189

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 359

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 269

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 271

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 198

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 196

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position:
Alignm length: 399
Alignm identity: 247
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 20

Conread position: 1-394
Cow position:
Alignm length: 397
Alignm identity: 243
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 41

Conread position: 1-395
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 399
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 99, 104

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 198

Conread position: 1-396
Cow position:
Alignm length: 413
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 241, 0

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 267, 259

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 273

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 296

Conread position: 1-396
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-265
Cow position:
Alignm length: 265
Alignm identity: 169
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 54

Conread position: 2-394
Cow position:
Alignm length: 394
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 185, 121

Conread position: 2-394
Cow position:
Alignm length: 394
Alignm identity: 231
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 339, 364

Conread position: 3-394
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 190

Conread position: 4-395
Cow position:
Alignm length: 393
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 4-396
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 11-394
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 252

Conread position: 15-352
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 31

Conread position: 17-332
Cow position:
Alignm length: 316
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 23-350
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 273

Conread position: 23-394
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 24-394
Cow position:
Alignm length: 375
Alignm identity: 228
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 178, 172

Conread position: 24-396
Cow position:
Alignm length: 374
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 32

Conread position: 29-388
Cow position:
Alignm length: 360
Alignm identity: 224
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 29-396
Cow position:
Alignm length: 368
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-352
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 172, 164

Conread position: 31-390
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 70

Conread position: 36-320
Cow position:
Alignm length: 289
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 77

Conread position: 37-396
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 262

Conread position: 37-396
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 316

Conread position: 39-394
Cow position:
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 54-349
Cow position:
Alignm length: 296
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 60-394
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 83

Conread position: 68-396
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-343
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 116

Conread position: 73-349
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 116

Conread position: 98-396
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 38

Conread position: 116-349
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 122-349
Cow position:
Alignm length: 229
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 155, 139

Conread position: 124-396
Cow position:
Alignm length: 273
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 205-394
Cow position:
Alignm length: 190
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.