Cow genome map

Conread name: Pla1-C0001062_A21

Conread position: 1-224
Cow position: chr3:62721796-62721573 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-271
Cow position: chr3:62743201-62743471 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-295
Cow position: chr3:62721880-62721586 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 256, 262

Conread position: 1-313
Cow position: chr3:68046046-68046356 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 297, 0

Conread position: 1-329
Cow position: chr3:62742802-62743114 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 203

Conread position: 1-349
Cow position: chr3:62722300-62721952 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 282

Conread position: 1-349
Cow position: chr3:68045962-68046310 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-369
Cow position: chr3:68027369-68027737 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr3:62722216-62721833 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-390
Cow position: chr3:62743038-62743422 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 78

Conread position: 1-391
Cow position: chr3:62722048-62721658 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 102

Conread position: 1-392
Cow position: chr3:62742555-62742942 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 84

Conread position: 1-394
Cow position: chr3:62722132-62721739 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 260

Conread position: 1-394
Cow position: chr3:68027201-68027594 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chr3:68027285-68027678 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chr3:68045794-68046187 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 111

Conread position: 1-396
Cow position: chr3:68045710-68046105 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 197

Conread position: 2-354
Cow position: chr3:62743118-62743470 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-396
Cow position: chr3:68027118-68027512 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-345
Cow position: chr3:20194918-20195259 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 212
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 7

Conread position: 3-351
Cow position: chr3:62742389-62742734 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 184, 192

Conread position: 3-391
Cow position: chr3:62721962-62721574 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-337
Cow position: chr3:62742306-62742639 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 47

Conread position: 5-394
Cow position: chr3:68045882-68046271 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-287
Cow position: chr3:68027458-68027739 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 270, 263

Conread position: 19-349
Cow position: chr3:68045560-68045890 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-350
Cow position: chr3:62742658-62742984 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 92

Conread position: 24-391
Cow position: chr3:62722361-62721994 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 27-391
Cow position: chr3:68027059-68027423 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 236

Conread position: 27-396
Cow position: chr3:68045652-68046021 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 236

Conread position: 31-347
Cow position: chr3:77351269-77350955 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 88

Conread position: 33-343
Cow position: chr3:62742252-62742561 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 36-384
Cow position: chr3:77350936-77350591 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 76

Conread position: 68-389
Cow position: chr3:68027016-68027337 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 108-394
Cow position: chr3:62722361-62722075 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 23

Conread position: 118-396
Cow position: chr3:68045575-68045853 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 125-396
Cow position: chr3:68026990-68027260 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 11

Conread position: 133-390
Cow position: chr3:16020467-16020217 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.