Cow genome map
| Conread name: | Pla1-C0001062_A21 |
| Conread position: | 1-259 |
| Cow position: | chr6:49341185-49341443 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-331 |
| Cow position: | chr6:49341101-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-349 |
| Cow position: | chr6:49396156-49396498 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-349 |
| Cow position: | chr6:49396318-49396666 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-349 |
| Cow position: | chr6:49396570-49396918 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 284, 291 |
| Conread position: | 1-393 |
| Cow position: | chr6:49341017-49341409 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr6:49340429-49340822 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr6:49340513-49340906 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 196 |
| Conread position: | 1-394 |
| Cow position: | chr6:49340597-49340990 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr6:49340765-49341158 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 260 |
| Conread position: | 1-394 |
| Cow position: | chr6:49340933-49341326 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 352 |
| Conread position: | 1-394 |
| Cow position: | chr6:49396234-49396627 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr6:49396486-49396879 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-396 |
| Cow position: | chr6:49396402-49396797 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-394 |
| Cow position: | chr6:49395905-49396291 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 4-394 |
| Cow position: | chr6:49340683-49341074 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-394 |
| Cow position: | chr6:49340851-49341242 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-394 |
| Cow position: | chr6:49429104-49429486 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 278, 269 |
| Conread position: | 21-394 |
| Cow position: | chr6:49340365-49340738 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-222 |
| Cow position: | chr6:49362641-49362825 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-348 |
| Cow position: | chr6:49396692-49397001 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 163, 169 |
Show alignments to all cow chromosomes.