Cow genome map
Conread name: | Pla1-C0001062_A21 |
Conread position: | 1-233 |
Cow position: | chr7:42878495-42878263 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 155 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-244 |
Cow position: | chr7:8278125-8278368 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 164 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 117, 108 |
Conread position: | 1-265 |
Cow position: | chr7:8325850-8326114 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 187 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 128, 102 |
Conread position: | 1-284 |
Cow position: | chr7:1438442-1438724 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 189 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 1-304 |
Cow position: | chr7:1014298-1014601 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 208 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 275, 267 |
Conread position: | 1-321 |
Cow position: | chr7:1015132-1015452 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 216 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-349 |
Cow position: | chr7:8277789-8278137 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 236 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 122, 105 |
Conread position: | 1-349 |
Cow position: | chr7:8324758-8325106 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 229 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 60, 19 |
Conread position: | 1-349 |
Cow position: | chr7:8324926-8325274 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 222 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 38, 21 |
Conread position: | 1-349 |
Cow position: | chr7:18390187-18390535 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-349 |
Cow position: | chr7:18390271-18390619 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-349 |
Cow position: | chr7:18390439-18390787 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 227 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-350 |
Cow position: | chr7:1438190-1438539 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 214 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 255, 269 |
Conread position: | 1-350 |
Cow position: | chr7:1439916-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 222 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-351 |
Cow position: | chr7:8243411-8243761 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 218 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 32, 22 |
Conread position: | 1-351 |
Cow position: | chr7:8243747-8244094 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 225 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 269, 254 |
Conread position: | 1-388 |
Cow position: | chr7:1015048-1015435 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-388 |
Cow position: | chr7:18390355-18390742 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 219 |
Conread position: | 1-394 |
Cow position: | chr7:1014466-1014853 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 241 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 1-394 |
Cow position: | chr7:1014712-1015105 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:1014796-1015189 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 198 |
Conread position: | 1-394 |
Cow position: | chr7:1014964-1015357 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 1-394 |
Cow position: | chr7:3179806-3180199 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:3179974-3180367 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:3180058-3180451 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:3180142-3180535 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 260 |
Conread position: | 1-394 |
Cow position: | chr7:3180226-3180619 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:3180394-3180787 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:8325514-8325907 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 253 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 122, 102 |
Conread position: | 1-394 |
Cow position: | chr7:8325682-8326075 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 263 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 28, 15 |
Conread position: | 1-394 |
Cow position: | chr7:11600826-11600432 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 390, 0 |
Conread position: | 1-394 |
Cow position: | chr7:11600994-11600601 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 18 |
Conread position: | 1-394 |
Cow position: | chr7:11601078-11600685 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 102 |
Conread position: | 1-394 |
Cow position: | chr7:42878831-42878438 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:42878915-42878522 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr7:42878999-42878606 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 262 |
Conread position: | 1-394 |
Cow position: | chr7:42879251-42878858 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-396 |
Cow position: | chr7:3180478-3180872 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 23 |
Conread position: | 1-396 |
Cow position: | chr7:8277369-8277764 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 252 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 281, 275 |
Conread position: | 1-396 |
Cow position: | chr7:18390019-18390414 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 245 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 104, 115 |
Conread position: | 1-396 |
Cow position: | chr7:42878663-42878267 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 0 |
Conread position: | 1-396 |
Cow position: | chr7:42878747-42878352 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 347, 360 |
Conread position: | 1-396 |
Cow position: | chr7:42879083-42878688 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-396 |
Cow position: | chr7:42879167-42878772 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 360 |
Conread position: | 2-350 |
Cow position: | chr7:1438359-1438707 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 230 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-394 |
Cow position: | chr7:3179724-3180115 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-394 |
Cow position: | chr7:3179892-3180283 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 275 |
Conread position: | 3-394 |
Cow position: | chr7:3180312-3180703 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 190 |
Conread position: | 4-266 |
Cow position: | chr7:1440002-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 181 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-396 |
Cow position: | chr7:1439835-1440226 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 5-394 |
Cow position: | chr7:1014386-1014769 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 255 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 259, 0 |
Conread position: | 6-394 |
Cow position: | chr7:1438279-1438667 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 238 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-394 |
Cow position: | chr7:11601157-11600769 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 255 |
Conread position: | 24-394 |
Cow position: | chr7:1014903-1015273 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 91 |
Conread position: | 28-394 |
Cow position: | chr7:1014655-1015021 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 243 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 73, 78 |
Conread position: | 31-394 |
Cow position: | chr7:42879305-42878942 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 34-394 |
Cow position: | chr7:8243609-8243972 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 231 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 11, 242 |
Conread position: | 37-343 |
Cow position: | chr7:8277741-8278047 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 201 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 254, 224 |
Conread position: | 37-394 |
Cow position: | chr7:8325130-8325487 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 244 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 90, 69 |
Conread position: | 37-395 |
Cow position: | chr7:11601210-11600851 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 236 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 356, 0 |
Conread position: | 38-343 |
Cow position: | chr7:8243281-8243585 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 189 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 163, 99 |
Conread position: | 38-349 |
Cow position: | chr7:8277658-8277969 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 211 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 77, 65 |
Conread position: | 38-349 |
Cow position: | chr7:8325299-8325610 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 211 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 71, 85 |
Conread position: | 38-350 |
Cow position: | chr7:8325383-8325695 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 214 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 86, 68 |
Conread position: | 38-352 |
Cow position: | chr7:8325635-8325949 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 204 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-394 |
Cow position: | chr7:1439703-1440056 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 229 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 61, 65 |
Conread position: | 38-394 |
Cow position: | chr7:8277910-8278266 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 231 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 85, 72 |
Conread position: | 39-271 |
Cow position: | chr7:11434508-11434276 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 152 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 39-349 |
Cow position: | chr7:8242946-8243256 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 192 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 218, 224 |
Conread position: | 39-394 |
Cow position: | chr7:28846570-28846925 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 217 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 76, 72 |
Conread position: | 42-346 |
Cow position: | chr7:8277997-8278302 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 210 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 6, 65 |
Conread position: | 43-394 |
Cow position: | chr7:11600868-11600517 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 227 |
Conread position: | 44-389 |
Cow position: | chr7:1014257-1014602 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 225 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 260, 250 |
Conread position: | 52-394 |
Cow position: | chr7:18390154-18390496 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 233 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 68, 57 |
Conread position: | 56-334 |
Cow position: | chr7:8243382-8243660 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 191 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 61, 47 |
Conread position: | 56-351 |
Cow position: | chr7:8277256-8277551 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 187 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 69, 44 |
Conread position: | 63-346 |
Cow position: | chr7:8324736-8325019 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 40 |
Conread position: | 64-394 |
Cow position: | chr7:18389997-18390328 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 215 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 8, 219 |
Conread position: | 75-394 |
Cow position: | chr7:3179712-3180031 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 211 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-349 |
Cow position: | chr7:1014224-1014478 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 170 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 160, 168 |
Conread position: | 118-394 |
Cow position: | chr7:3179671-3179947 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 179 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 35, 25 |
Conread position: | 122-349 |
Cow position: | chr7:1439448-1439673 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 150 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 206-397 |
Cow position: | chr7:1439448-1439636 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 130 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 148, 0 |
Show alignments to all cow chromosomes.