Cow genome map
Conread name: | Pla1-C0001062_A21 |
Conread position: | 1-225 |
Cow position: | chr8:46817162-46817386 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 146 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-255 |
Cow position: | chr8:48406513-48406259 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 173 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 187, 197 |
Conread position: | 1-295 |
Cow position: | chr8:46817078-46817372 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 205 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 255, 263 |
Conread position: | 1-331 |
Cow position: | chr8:45201715-45202038 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 213 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 260, 0 |
Conread position: | 1-334 |
Cow position: | chr8:48407101-48406768 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 188 |
Conread position: | 1-343 |
Cow position: | chr8:45201631-45201973 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 228 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-349 |
Cow position: | chr8:46816574-46816922 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-388 |
Cow position: | chr8:55581351-55581738 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 249 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 32, 19 |
Conread position: | 1-391 |
Cow position: | chr8:6958055-6957666 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 251 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 253, 281 |
Conread position: | 1-391 |
Cow position: | chr8:46816910-46817300 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 347 |
Conread position: | 1-394 |
Cow position: | chr8:45200959-45201352 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:45201379-45201772 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 360 |
Conread position: | 1-394 |
Cow position: | chr8:45201463-45201856 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816070-46816463 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816154-46816547 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816238-46816631 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816322-46816715 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816406-46816799 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816490-46816883 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816658-46817051 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:46816742-46817135 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 220 |
Conread position: | 1-394 |
Cow position: | chr8:48407017-48406624 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 264 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 112, 103 |
Conread position: | 1-394 |
Cow position: | chr8:55580763-55581156 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 243 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 35, 11 |
Conread position: | 1-394 |
Cow position: | chr8:55580847-55581240 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:55580931-55581324 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-394 |
Cow position: | chr8:55581015-55581408 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 368, 357 |
Conread position: | 1-394 |
Cow position: | chr8:55581099-55581492 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 356 |
Conread position: | 1-394 |
Cow position: | chr8:55581183-55581576 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 185 |
Conread position: | 1-394 |
Cow position: | chr8:55581267-55581660 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 103 |
Conread position: | 1-395 |
Cow position: | chr8:45201547-45201941 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-396 |
Cow position: | chr8:45201043-45201438 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-396 |
Cow position: | chr8:45201127-45201522 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-396 |
Cow position: | chr8:45201211-45201606 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 262 |
Conread position: | 1-396 |
Cow position: | chr8:45201295-45201690 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-396 |
Cow position: | chr8:48406681-48406286 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 187 |
Conread position: | 1-396 |
Cow position: | chr8:48407269-48406874 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 367, 361 |
Conread position: | 1-396 |
Cow position: | chr8:48407521-48407126 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 198 |
Conread position: | 3-351 |
Cow position: | chr8:48407435-48407087 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-394 |
Cow position: | chr8:45200718-45201100 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 242 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 214, 76 |
Conread position: | 3-396 |
Cow position: | chr8:46816996-46817389 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 262 |
Conread position: | 4-394 |
Cow position: | chr8:46816828-46817219 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 358 |
Conread position: | 4-394 |
Cow position: | chr8:48407603-48407212 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 5-391 |
Cow position: | chr8:48407181-48406795 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-396 |
Cow position: | chr8:46816009-46816381 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-394 |
Cow position: | chr8:48407325-48406960 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-394 |
Cow position: | chr8:48406736-48406372 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 39-394 |
Cow position: | chr8:46815850-46816211 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 239 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 13, 81 |
Conread position: | 39-396 |
Cow position: | chr8:45200913-45201270 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 28 |
Conread position: | 73-338 |
Cow position: | chr8:48407617-48407352 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 184 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 127-394 |
Cow position: | chr8:48407647-48407380 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 182 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 149, 145 |
Conread position: | 165-391 |
Cow position: | chr8:6958059-6957833 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.