Cow genome map

Conread name: Pla1-C0001062_A21

Conread position: 1-209
Cow position: chrX:29045634-29045426 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-310
Cow position: chrX:25324470-25324165 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 229, 0

Conread position: 1-328
Cow position: chrX:25310251-25310578 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 1-330
Cow position: chrX:29044983-29044654 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-343
Cow position: chrX:25309831-25310173 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-343
Cow position: chrX:25310167-25310509 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 101, 115

Conread position: 1-349
Cow position: chrX:13826671-13826323 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 31

Conread position: 1-369
Cow position: chrX:13826923-13826556 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 234
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 115

Conread position: 1-390
Cow position: chrX:25325226-25324837 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-392
Cow position: chrX:25324722-25324331 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:25309915-25310308 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 273

Conread position: 1-394
Cow position: chrX:25309999-25310392 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 275, 281

Conread position: 1-394
Cow position: chrX:25310083-25310476 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 198

Conread position: 1-394
Cow position: chrX:25324806-25324413 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:25324974-25324581 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 24

Conread position: 1-394
Cow position: chrX:25325058-25324665 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:25325142-25324749 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:25325394-25325001 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:25325478-25325085 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:25325562-25325169 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:29045067-29044674 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-394
Cow position: chrX:29045151-29044758 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 352

Conread position: 1-394
Cow position: chrX:29045235-29044842 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 360

Conread position: 1-396
Cow position: chrX:25309747-25310142 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 365

Conread position: 2-394
Cow position: chrX:25325729-25325337 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 2-394
Cow position: chrX:29045318-29044926 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 3-256
Cow position: chrX:14181195-14180942 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-394
Cow position: chrX:25325308-25324917 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-341
Cow position: chrX:14181279-14180941 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 4-349
Cow position: chrX:25324888-25324542 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 5-396
Cow position: chrX:25309667-25310058 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 256

Conread position: 21-395
Cow position: chrX:25325878-25325504 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 237
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 75, 90

Conread position: 30-351
Cow position: chrX:29045773-29045452 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 36-394
Cow position: chrX:25325779-25325421 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 38-356
Cow position: chrX:12627333-12627650 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 203
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 90

Conread position: 40-394
Cow position: chrX:29045361-29045010 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 45-394
Cow position: chrX:29045842-29045493 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 60-394
Cow position: chrX:25325587-25325253 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 134-396
Cow position: chrX:29045837-29045575 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.