Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 3-309
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 29

Conread position: 5-159
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 27

Conread position: 5-159
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 21

Conread position: 5-165
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 24

Conread position: 5-190
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 5-190
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 23

Conread position: 5-190
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 50

Conread position: 5-194
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 24

Conread position: 5-197
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 49

Conread position: 5-198
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 50

Conread position: 5-198
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 118, 27

Conread position: 5-201
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 24

Conread position: 5-203
Cow position:
Alignm length: 206
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 24

Conread position: 5-206
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 24

Conread position: 5-211
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 46, 24

Conread position: 5-222
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 13

Conread position: 5-238
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 71, 27

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 5

Conread position: 5-247
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 118, 24

Conread position: 5-280
Cow position:
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 27

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 47

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 5-283
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 28

Conread position: 5-285
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 28

Conread position: 5-285
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-285
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 51

Conread position: 5-286
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 109, 41

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-291
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 159

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 46, 20

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 28

Conread position: 5-293
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 112, 24

Conread position: 5-293
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-293
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 28

Conread position: 5-293
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 118, 27

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 58

Conread position: 5-293
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 50

Conread position: 5-293
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 228

Conread position: 5-298
Cow position:
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 27

Conread position: 5-302
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 70, 39

Conread position: 5-302
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 59

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 24

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 50

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 69, 28

Conread position: 5-306
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-307
Cow position:
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-307
Cow position:
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 5-310
Cow position:
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 5-311
Cow position:
Alignm length: 319
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 50

Conread position: 5-317
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 5-321
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 64

Conread position: 5-324
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 54, 28

Conread position: 6-232
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 26

Conread position: 6-233
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 26

Conread position: 6-280
Cow position:
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 6-291
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 23

Conread position: 7-177
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 25

Conread position: 8-291
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 47

Conread position: 9-308
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 45

Conread position: 10-283
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 20

Conread position: 29-310
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 34-292
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 154

Conread position: 34-296
Cow position:
Alignm length: 272
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 36-302
Cow position:
Alignm length: 277
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 229

Conread position: 38-213
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 156

Conread position: 39-185
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 113

Conread position: 39-293
Cow position:
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 167

Conread position: 39-306
Cow position:
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 74

Conread position: 41-283
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 41-304
Cow position:
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 43-323
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 24, 36

Conread position: 52-293
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 55-233
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 133

Conread position: 55-242
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 55-265
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 79

Conread position: 57-308
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 82

Conread position: 58-307
Cow position:
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 186

Conread position: 66-293
Cow position:
Alignm length: 235
Alignm identity: 141
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 158

Conread position: 67-322
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 165

Conread position: 72-241
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 80

Conread position: 164-293
Cow position:
Alignm length: 131
Alignm identity: 109
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 184-310
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 0

Show alignments to all cow chromosomes.