Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 2-205
Cow position: chr16:18205083-18204861 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 32

Conread position: 2-293
Cow position: chr16:48341362-48341663 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 27

Conread position: 5-159
Cow position: chr16:2426261-2426418 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 28

Conread position: 5-160
Cow position: chr16:45683529-45683371 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 50

Conread position: 5-166
Cow position: chr16:47518152-47517987 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 23

Conread position: 5-169
Cow position: chr16:3632906-3632741 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 24

Conread position: 5-186
Cow position: chr16:43986860-43987050 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 11

Conread position: 5-187
Cow position: chr16:43801555-43801749 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 27

Conread position: 5-190
Cow position: chr16:46223663-46223863 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 43, 24

Conread position: 5-198
Cow position: chr16:825314-825113 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 27

Conread position: 5-202
Cow position: chr16:16625197-16624991 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 24

Conread position: 5-212
Cow position: chr16:14758029-14757814 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 24

Conread position: 5-213
Cow position: chr16:7010158-7009952 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 33

Conread position: 5-213
Cow position: chr16:44972906-44973122 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 24

Conread position: 5-227
Cow position: chr16:26671294-26671508 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 5-230
Cow position: chr16:19409513-19409746 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 50, 24

Conread position: 5-234
Cow position: chr16:39416170-39416403 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 24

Conread position: 5-238
Cow position: chr16:4712215-4711967 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 27

Conread position: 5-238
Cow position: chr16:22320447-22320689 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 27

Conread position: 5-241
Cow position: chr16:2963015-2963260 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 50

Conread position: 5-241
Cow position: chr16:7467450-7467209 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 50

Conread position: 5-241
Cow position: chr16:42079518-42079752 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-241
Cow position: chr16:54231510-54231751 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 5-247
Cow position: chr16:3148197-3148450 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-247
Cow position: chr16:5844757-5844498 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 51, 24

Conread position: 5-247
Cow position: chr16:15904379-15904626 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 215

Conread position: 5-248
Cow position: chr16:11007554-11007290 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 27

Conread position: 5-249
Cow position: chr16:9417702-9417451 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 118, 27

Conread position: 5-249
Cow position: chr16:13989133-13988879 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 161

Conread position: 5-254
Cow position: chr16:48495077-48495333 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-265
Cow position: chr16:8367890-8368154 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 24

Conread position: 5-280
Cow position: chr16:41377-41091 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 5-280
Cow position: chr16:41576082-41575800 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 27

Conread position: 5-281
Cow position: chr16:48411477-48411191 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:3769166-3769456 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:5350666-5350953 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:8813263-8813548 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:10441080-10440794 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 24

Conread position: 5-282
Cow position: chr16:14662281-14662553 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 24

Conread position: 5-282
Cow position: chr16:23249113-23249400 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:24240558-24240845 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:25444718-25444431 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr16:43562554-43562840 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 39

Conread position: 5-283
Cow position: chr16:48010566-48010835 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 118, 27

Conread position: 5-284
Cow position: chr16:237319-237034 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 5-285
Cow position: chr16:23563288-23563004 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 5-285
Cow position: chr16:47404222-47403932 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 24

Conread position: 5-286
Cow position: chr16:4079120-4079410 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 50

Conread position: 5-286
Cow position: chr16:13422084-13422371 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 47

Conread position: 5-286
Cow position: chr16:23403655-23403365 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 5-288
Cow position: chr16:29158440-29158170 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 115, 21

Conread position: 5-291
Cow position: chr16:39033503-39033799 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 50

Conread position: 5-291
Cow position: chr16:45609249-45608961 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 62

Conread position: 5-291
Cow position: chr16:51087624-51087329 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 50

Conread position: 5-291
Cow position: chr16:51400716-51401001 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 185

Conread position: 5-291
Cow position: chr16:51641089-51640795 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-292
Cow position: chr16:25169068-25168781 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 54, 24

Conread position: 5-292
Cow position: chr16:49142230-49142528 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 5-292
Cow position: chr16:49515939-49516239 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-293
Cow position: chr16:1734581-1734282 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-293
Cow position: chr16:7303599-7303300 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr16:8871599-8871895 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 208

Conread position: 5-293
Cow position: chr16:14029315-14029605 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 5-293
Cow position: chr16:17142241-17141947 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 5-293
Cow position: chr16:18694124-18694428 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-293
Cow position: chr16:19062677-19062381 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 288

Conread position: 5-293
Cow position: chr16:24147492-24147201 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 22

Conread position: 5-293
Cow position: chr16:24407754-24407454 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr16:24636675-24636970 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 23

Conread position: 5-293
Cow position: chr16:25157565-25157850 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-293
Cow position: chr16:25964741-25964454 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-293
Cow position: chr16:37670667-37670947 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 33

Conread position: 5-293
Cow position: chr16:47773105-47772808 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-297
Cow position: chr16:39616057-39615765 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-300
Cow position: chr16:15187902-15187601 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 5-301
Cow position: chr16:12160442-12160747 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 49

Conread position: 5-301
Cow position: chr16:23737509-23737228 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 76

Conread position: 5-302
Cow position: chr16:193097-193402 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 39, 24

Conread position: 5-302
Cow position: chr16:52527072-52526766 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 6

Conread position: 5-302
Cow position: chr16:53509689-53509991 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-303
Cow position: chr16:840112-839811 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:1563545-1563855 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 5-304
Cow position: chr16:2232884-2233193 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position: chr16:2724382-2724691 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position: chr16:4426932-4426624 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:4756852-4756557 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position: chr16:4972685-4972992 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 187

Conread position: 5-304
Cow position: chr16:5525257-5525566 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position: chr16:5665941-5665634 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 5-304
Cow position: chr16:5756777-5756462 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 24

Conread position: 5-304
Cow position: chr16:7504275-7503972 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position: chr16:11633002-11633311 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:12535126-12535415 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 121, 27

Conread position: 5-304
Cow position: chr16:14040267-14039958 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position: chr16:14100690-14100385 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position: chr16:15979536-15979845 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:16096037-16095732 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 24

Conread position: 5-304
Cow position: chr16:21018401-21018092 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 5-304
Cow position: chr16:22798862-22799171 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:24209556-24209865 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position: chr16:25935585-25935279 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 118

Conread position: 5-304
Cow position: chr16:26627594-26627285 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position: chr16:26666553-26666237 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 5-304
Cow position: chr16:26990099-26990407 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 5-304
Cow position: chr16:27730539-27730848 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:28193459-28193767 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 181

Conread position: 5-304
Cow position: chr16:28468281-28468590 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:37478019-37478328 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 50

Conread position: 5-304
Cow position: chr16:40293328-40293637 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:41034142-41033832 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 24

Conread position: 5-304
Cow position: chr16:43770313-43770618 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 23

Conread position: 5-304
Cow position: chr16:43894419-43894729 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr16:45534299-45533995 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 32

Conread position: 5-305
Cow position: chr16:5435667-5435357 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-305
Cow position: chr16:7541323-7541018 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-305
Cow position: chr16:18745192-18745498 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 24

Conread position: 5-305
Cow position: chr16:29512613-29512307 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 27

Conread position: 5-307
Cow position: chr16:14351841-14352154 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 5-307
Cow position: chr16:23533158-23533469 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-307
Cow position: chr16:29538971-29539277 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 214

Conread position: 5-307
Cow position: chr16:42074051-42074369 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-307
Cow position: chr16:44676196-44675883 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 5-309
Cow position: chr16:2480313-2480621 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-309
Cow position: chr16:5895271-5894973 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 24

Conread position: 5-309
Cow position: chr16:15369833-15369524 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 5-309
Cow position: chr16:27013239-27012930 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 5-309
Cow position: chr16:28206269-28206583 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-311
Cow position: chr16:9786153-9785841 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 5-318
Cow position: chr16:25174076-25173762 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 24

Conread position: 5-319
Cow position: chr16:49742687-49743011 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 5-322
Cow position: chr16:41834707-41834385 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 5-335
Cow position: chr16:42745642-42745969 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 27

Conread position: 6-233
Cow position: chr16:7043091-7043327 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 49

Conread position: 6-267
Cow position: chr16:15485630-15485361 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 114

Conread position: 6-285
Cow position: chr16:32118420-32118131 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 6-300
Cow position: chr16:56913396-56913701 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 7-281
Cow position: chr16:25344819-25344535 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 48

Conread position: 8-280
Cow position: chr16:49126873-49127134 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 57, 24

Conread position: 9-244
Cow position: chr16:14441212-14440978 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 114, 20

Conread position: 9-283
Cow position: chr16:41804612-41804892 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 61, 20

Conread position: 10-219
Cow position: chr16:42254481-42254694 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 19

Conread position: 13-324
Cow position: chr16:25454627-25454948 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 42

Conread position: 18-243
Cow position: chr16:55910986-55911213 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 6

Conread position: 29-242
Cow position: chr16:51997532-51997741 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 26

Conread position: 29-304
Cow position: chr16:7155418-7155137 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 146

Conread position: 29-304
Cow position: chr16:7457171-7457449 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 32-308
Cow position: chr16:8481816-8482091 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 162

Conread position: 33-288
Cow position: chr16:47017943-47018200 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 19

Conread position: 34-240
Cow position: chr16:21090903-21090690 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 36-309
Cow position: chr16:2224139-2224421 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 69

Conread position: 38-309
Cow position: chr16:44256325-44256603 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 186

Conread position: 39-207
Cow position: chr16:3027239-3027063 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 39-207
Cow position: chr16:3030465-3030641 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 39-292
Cow position: chr16:24445262-24444985 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 39-304
Cow position: chr16:47367794-47367519 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 40-270
Cow position: chr16:13790843-13790617 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 145

Conread position: 40-282
Cow position: chr16:45754825-45755067 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 175

Conread position: 40-286
Cow position: chr16:45703993-45704244 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 69

Conread position: 40-307
Cow position: chr16:49219147-49219416 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 208

Conread position: 41-221
Cow position: chr16:39645787-39645600 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 25

Conread position: 42-222
Cow position: chr16:19797890-19798079 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 43-290
Cow position: chr16:53612603-53612350 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 80, 138

Conread position: 46-307
Cow position: chr16:684808-685076 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 221

Conread position: 47-203
Cow position: chr16:14722464-14722626 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 144

Conread position: 47-232
Cow position: chr16:24876166-24876348 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 110, 72

Conread position: 47-238
Cow position: chr16:16237184-16237384 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 48-332
Cow position: chr16:37925187-37925480 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 52-304
Cow position: chr16:20204791-20204537 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 70, 44

Conread position: 54-304
Cow position: chr16:30052736-30052481 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 209

Conread position: 55-285
Cow position: chr16:52856056-52856287 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 53

Conread position: 56-283
Cow position: chr16:16267120-16267347 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 90

Conread position: 62-286
Cow position: chr16:54703279-54703048 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 209

Conread position: 62-293
Cow position: chr16:42751926-42751695 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 54

Conread position: 71-309
Cow position: chr16:12244270-12244513 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 137

Conread position: 75-304
Cow position: chr16:7673693-7673928 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 78, 20

Conread position: 76-307
Cow position: chr16:11054758-11054521 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 26

Conread position: 77-229
Cow position: chr16:49230512-49230672 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 99-293
Cow position: chr16:48371357-48371559 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 105-293
Cow position: chr16:39475574-39475373 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 143

Conread position: 118-307
Cow position: chr16:819692-819499 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 100

Conread position: 127-318
Cow position: chr16:51041252-51041066 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 34

Show alignments to all cow chromosomes.