Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 3-309
Cow position:
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 49

Conread position: 4-304
Cow position:
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 5-155
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 24

Conread position: 5-159
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 28

Conread position: 5-166
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 118, 24

Conread position: 5-181
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 24

Conread position: 5-183
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 24

Conread position: 5-184
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 24

Conread position: 5-184
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 24

Conread position: 5-190
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 50

Conread position: 5-190
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 5-193
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 24

Conread position: 5-209
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 50

Conread position: 5-222
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-232
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 24

Conread position: 5-238
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 5-247
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-255
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 5

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 5-282
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 39

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-284
Cow position:
Alignm length: 287
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 5-284
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 5-285
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 24

Conread position: 5-285
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-285
Cow position:
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 214

Conread position: 5-286
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 24

Conread position: 5-287
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 24

Conread position: 5-287
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 5-288
Cow position:
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 5-288
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 5-291
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-291
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 113

Conread position: 5-293
Cow position:
Alignm length: 301
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 5-293
Cow position:
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 24

Conread position: 5-293
Cow position:
Alignm length: 291
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 24

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-294
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 5-295
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 21

Conread position: 5-302
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 13

Conread position: 5-302
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 254

Conread position: 5-303
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 27

Conread position: 5-303
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 186

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 50

Conread position: 5-304
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 118, 28

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 47

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 29

Conread position: 5-304
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 238

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 267

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 5-304
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 28

Conread position: 5-305
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-305
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 48

Conread position: 5-307
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 266

Conread position: 5-307
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 5-307
Cow position:
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 5-315
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 28

Conread position: 5-331
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-332
Cow position:
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 6-208
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 17

Conread position: 6-229
Cow position:
Alignm length: 235
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 26

Conread position: 6-249
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 14

Conread position: 6-304
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 6-307
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 23

Conread position: 7-159
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 25

Conread position: 7-300
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 12-224
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 17

Conread position: 13-318
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 46, 16

Conread position: 29-286
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 203

Conread position: 32-206
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 129

Conread position: 34-265
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 144

Conread position: 36-304
Cow position:
Alignm length: 276
Alignm identity: 199
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 111, 30

Conread position: 38-241
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 85, 14

Conread position: 39-191
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 13

Conread position: 39-229
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 39-242
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 39-309
Cow position:
Alignm length: 279
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 16

Conread position: 40-291
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 22

Conread position: 40-293
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 53

Conread position: 40-304
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 216

Conread position: 42-304
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 10

Conread position: 42-307
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 24

Conread position: 43-295
Cow position:
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 71

Conread position: 43-309
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 169

Conread position: 44-293
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 45-286
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 131

Conread position: 47-278
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 219

Conread position: 47-304
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 16, 71

Conread position: 48-308
Cow position:
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 51-309
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 51

Conread position: 57-188
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 109

Conread position: 59-291
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 98, 62

Conread position: 66-281
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 66-282
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 120

Conread position: 72-266
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 75-285
Cow position:
Alignm length: 219
Alignm identity: 177
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 73, 43

Show alignments to all cow chromosomes.