Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 2-266
Cow position:
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 27

Conread position: 2-282
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 36

Conread position: 5-159
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 6

Conread position: 5-170
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 5-174
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 24

Conread position: 5-178
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 24

Conread position: 5-190
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 24

Conread position: 5-195
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 5-202
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 24

Conread position: 5-205
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 24

Conread position: 5-206
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 118, 24

Conread position: 5-208
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 33

Conread position: 5-214
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 5-221
Cow position:
Alignm length: 231
Alignm identity: 180
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 5-222
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 18

Conread position: 5-223
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 24

Conread position: 5-231
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 22

Conread position: 5-233
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 28

Conread position: 5-233
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 24

Conread position: 5-235
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 24

Conread position: 5-238
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 46, 24

Conread position: 5-241
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 40, 24

Conread position: 5-242
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 20

Conread position: 5-247
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-247
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 21

Conread position: 5-247
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 62, 40

Conread position: 5-250
Cow position:
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-260
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 116, 24

Conread position: 5-276
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-279
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 115, 47

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 5-283
Cow position:
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 5-286
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 5-286
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-290
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-291
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 39, 139

Conread position: 5-291
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 33, 24

Conread position: 5-291
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 122, 24

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 24

Conread position: 5-293
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position:
Alignm length: 291
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 24

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 5-293
Cow position:
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-293
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-294
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-302
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 28

Conread position: 5-302
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-303
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 196

Conread position: 5-303
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 69, 28

Conread position: 5-303
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 24

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 39

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 27

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 47

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 27

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 57, 29

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 50

Conread position: 5-307
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 27

Conread position: 5-307
Cow position:
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 27

Conread position: 5-307
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 62, 24

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 24

Conread position: 5-308
Cow position:
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-308
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 33

Conread position: 5-309
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 28

Conread position: 5-309
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 118, 24

Conread position: 5-309
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 5-317
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-324
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 6-135
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 23

Conread position: 6-228
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 68, 27

Conread position: 6-242
Cow position:
Alignm length: 245
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 176

Conread position: 6-293
Cow position:
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 6-293
Cow position:
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 23

Conread position: 6-310
Cow position:
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 23

Conread position: 7-306
Cow position:
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 9-291
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 204

Conread position: 9-302
Cow position:
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 11-242
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 18

Conread position: 11-249
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 11-308
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 112, 18

Conread position: 13-331
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 15-190
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 5

Conread position: 25-325
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 11

Conread position: 29-312
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 25, 208

Conread position: 36-286
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 16, 81

Conread position: 36-292
Cow position:
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 36-293
Cow position:
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 233

Conread position: 36-332
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 37-293
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 196, 18

Conread position: 38-232
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 85, 146

Conread position: 38-292
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 39-291
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 11

Conread position: 39-307
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 49

Conread position: 39-307
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 40-181
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 12

Conread position: 40-190
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 40-291
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 66

Conread position: 40-304
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 42-285
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 45-307
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 7

Conread position: 46-291
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 172

Conread position: 47-227
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 5

Conread position: 47-267
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 75, 152

Conread position: 47-304
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 150

Conread position: 47-304
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 76, 151

Conread position: 52-242
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 174

Conread position: 52-293
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 16

Conread position: 53-302
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 56-322
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 25

Conread position: 61-291
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 98, 54

Conread position: 66-286
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 125

Conread position: 66-293
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 68

Conread position: 74-198
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 75-222
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 76-249
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 167, 40

Conread position: 80-199
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 172-307
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.